Clostridium botulinum A Hall: CLC_3216
Help
Entry
CLC_3216 CDS
T00575
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cbh
Clostridium botulinum A Hall
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbh03009
]
CLC_3216
Enzymes [BR:
cbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CLC_3216
Ribosome biogenesis [BR:
cbh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLC_3216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABS36111
UniProt:
A5I700
LinkDB
All DBs
Position
complement(3352533..3353249)
Genome browser
AA seq
238 aa
AA seq
DB search
MERLDKILANLGYGTRKEVKALIKKGQVDVDGEVVKDNGMQIDPEKNKIFVFGKELVYKK
YIYLMMNKPQGVVSATFDNYDETVIDLLEDEDRIFEPFPVGRLDKNTVGLLLLTNDGELN
HRLISPKWHVDKIYYAKINKKVTDEDIKKFKKGIILDDGYECFPAKLEIIKSFNEESEVR
VTIHEGKFHQVKRMFESVDKKVIYLKREEFGPLKLDESLEEGQYRELTDEEISILKNL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttagataaaatactagccaacttaggatatggtacaagaaaagaagttaag
gctttgattaaaaaagggcaagttgatgttgatggtgaagttgttaaagataatggtatg
caaatagatccagaaaaaaataaaatatttgtatttggaaaagaattagtttataaaaaa
tatatttatttaatgatgaataaaccccaaggggtagtttctgcaacttttgataactat
gatgaaactgttatagatttgttagaagatgaagacagaatttttgaaccttttcccgtg
ggtagattagataaaaatacggtaggcttacttttacttactaacgatggagagttaaat
cacagacttatatctcctaaatggcatgtggataaaatatattatgccaaaattaataaa
aaggttactgatgaagatataaagaaatttaagaaaggtataatattagatgatggttat
gaatgttttcctgcaaagcttgaaataataaaatcatttaatgaggaatcagaagtaaga
gttactatacatgaaggtaaatttcatcaagtcaaaagaatgtttgaaagtgttgataaa
aaggttatttacttaaaaagagaagaatttggaccattaaaattagatgagagcttagaa
gagggtcaatatagggaattaacagatgaagaaatatctatattaaaaaatctataa
DBGET
integrated database retrieval system
