Clostridium botulinum A Hall: CLC_3286
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Entry
CLC_3286 CDS
T00575
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03420
Nucleotide excision repair
cbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLC_3286
03430 Mismatch repair
CLC_3286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbh03400
]
CLC_3286
Enzymes [BR:
cbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLC_3286
DNA repair and recombination proteins [BR:
cbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLC_3286
MMR (mismatch excision repair)
Other MMR factors
CLC_3286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
SLFN-g3_helicase
Viral_helicase1
AAA_30
AAA_11
ResIII
UvrD_C_2
CbiA
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABS38951
LinkDB
All DBs
Position
complement(3441543..3443672)
Genome browser
AA seq
709 aa
AA seq
DB search
MDNNQINNSMDKYIELSMEREYLDFIIDKVRKETGIYLDKRKDIVKDIVEYRKEFLEEDK
NDEDKVVEYFDHERYLKEKLYGFTDKKLKELIILEQNPYFGKVNFIDEGDEDSIYIGRYG
FLETGNYKPFIVDWRAPICQIFYQGKLGNIAYESPDGKIEVDVKSKRQYVIRKGILKGMF
DSALDVKDEVLQMILSENTKEKLKDIVMTIQEEQDNLIRQPKDKAMIVNGVAGSGKTTIA
LHRVAYLLYNYRNQIQDKVLILGPNNIFVDYISEVLPSLGENGVKQTTFKDFIEDLLPTN
NFLEYDNYIERFIKKDNEFIEDIAYKQSKAYMEDLDCFMEDLERNIFITEDVILMEEVAI
DKKEIDEMLHSYYKYMPLFKRSRKIKRIVFSKIRDVRNKKVYEIQRQYEEKLKKLSEEEL
QLNKNNLEFERKNNIRNIVRKSIELKKSLVWLDNPQVLDIYNEFNNNNKLTVDDIIAILY
LKIKLEGLRYRNEIKHIVIDEAQDYSFLQFVVLKELTDCQSITIVGDVNQRTLPCKDEVP
MLCLDSVFNRVDVEYFNLDKSYRSTKEIIEYANKHLKTNKIVPLVREGDPVKEVTVKNSR
EAIDKVNYYLSYLENKGYENIAIITTTLEQGKVIGSELKKQMYINLIEREDIIYSGGKII
IPSYLSKGLEFDATILILDDNNIGENLKYIMATRALHEMIVVHKEGKKL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggataataatcagataaataattccatggataaatatatagaactaagtatggaaaga
gaatatttagattttataatagataaagtaagaaaagaaacaggaatatatttagataaa
agaaaagatatagtaaaagatatagtagaatataggaaagaatttttagaagaagataaa
aatgatgaagataaagtagtagagtactttgatcatgaaagatacttaaaagaaaagctt
tatggttttacggataaaaaactaaaagagctcataattttagaacagaatccttacttt
ggaaaagttaattttatagatgaaggggatgaagattctatctatataggtagatacgga
tttttagagacaggtaattataaaccttttattgtagattggagagctcctatatgccaa
atattttatcaggggaaattaggaaatatagcatatgaatcaccagatggtaaaatagag
gtagatgtaaaatctaaaaggcaatatgttatccgtaagggtatattaaaaggtatgttt
gattctgctttagatgtaaaagatgaagttcttcaaatgattttaagtgaaaataccaaa
gaaaaattaaaggatatagttatgactatacaagaagagcaagataacttaattagacaa
cctaaagacaaagctatgattgttaatggagttgcaggtagtggtaagactaccattgct
cttcatagagtagcatacttattatataattataggaaccaaatacaagataaagtacta
atactaggacctaataatattttcgtggattatatatcagaagtgttaccgagtctaggt
gaaaatggagttaaacaaactacctttaaggattttatagaagacttgctacctacaaat
aatttcctagaatatgataactatatagaaagatttataaaaaaagataatgaatttata
gaagatatagcatataaacaatctaaagcatatatggaagatttagattgttttatggaa
gatctagaacgaaacatatttattacagaagatgtaatattaatggaagaagttgctata
gataaaaaagaaatagacgaaatgcttcattcctattataaatatatgcctttatttaaa
agaagtaggaagataaaaagaatagtattttctaaaataagagatgtgagaaacaaaaaa
gtttatgaaattcaaagacaatatgaagaaaaactaaaaaaattatcagaggaagaacta
caactaaataaaaataatttagagtttgaaagaaaaaataatataagaaacatagtgaga
aaatctatagagttaaagaaatcattagtatggttagataatccacaggttttggatata
tataatgagtttaataataacaataagcttactgtagatgatattatagctatattatat
ttaaaaataaaattagagggtttaagatataggaatgaaataaaacatatagtaatagat
gaagcacaggattattcatttttacagtttgtagtattaaaagaacttacagattgtcaa
tctataactatagtaggagatgttaatcaaagaacattaccttgcaaggatgaagttcct
atgttatgcttagattctgtctttaatagagtcgatgtagagtattttaatttagataaa
agttatagatcaacaaaagagattatagagtacgctaataaacatttaaaaacaaataaa
attgttcctttggtgagagaaggagaccctgtaaaagaagtaacagtaaagaattcaagg
gaagcaatagataaggttaattattatttaagttatttagaaaataaagggtatgaaaat
attgcaattataacaactacactagaacaggggaaagttataggatcagaattaaaaaag
caaatgtatattaatttaatagagagagaagatataatttattctggaggtaagataata
attccatcttatttatcaaaaggtttagaatttgatgctactattttaatattagatgat
aataatataggagaaaatttaaaatatataatggctacaagagctttacatgaaatgata
gttgtacacaaagaaggtaaaaaattataa
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