Clostridium botulinum Ba4: CLJ_B0172
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Entry
CLJ_B0172 CDS
T00895
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbi
Clostridium botulinum Ba4
Pathway
cbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJ_B0172 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbi03021
]
CLJ_B0172 (rho)
03019 Messenger RNA biogenesis [BR:
cbi03019
]
CLJ_B0172 (rho)
Transcription machinery [BR:
cbi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLJ_B0172 (rho)
Messenger RNA biogenesis [BR:
cbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLJ_B0172 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
Spore_III_AA
SAP
AAA_22
AAA_25
HeH
Motif
Other DBs
NCBI-ProteinID:
ACQ51637
UniProt:
A0A3F2ZQS1
LinkDB
All DBs
Position
168954..170399
Genome browser
AA seq
481 aa
AA seq
DB search
MINKDYESMTVKELREIAKKLDIKNISKFKKNELIEEIKTSKPTAIEKDGKILVEKISPK
IIKSENNIHSKITKENGINEEKTSSLMKNNEENKAERLKEMINESQRAKGVLEIIENNNY
GFLRGQNYLSGPEDIYVSPSQIRRFNLRTGDEVEGKVRIPKDGEKFKALIYVERVNGENP
EKAVGRKPFESLVPIYPNERIKLETNSQDLSTRLMDIISPIGKGQRGMIVAPPKAGKTTL
LKKIAQSISRNNPLCKLIVLLIDERPEEVTDMQRSIKGEVIYSTFDEEPEHHTKVTYMVL
ERAKRMVEQGQDVVILLDSITRLSRAYNLTITPTGRTLSGGLDPGALVMPKKFFGAARNI
ENGGSLTILATALTETGSRMDDMIFEEFKGTGNMEVHLNRKLQERRIFPALDIYKSGTRR
DDLLFTDSLEKETAFNIRKLLYEENNVENVTEQVLSILSKTKTNEEFVNIISKMDMNKNN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgataaataaggattacgaaagtatgaccgttaaagagttaagagaaatagctaaaaag
cttgatataaaaaatatttctaagttcaaaaaaaatgaattaatagaagaaataaaaact
tcaaagccaacagccatagagaaagatgggaaaattttagttgaaaaaatatcacctaaa
atcataaaaagtgaaaataatatacatagcaaaataactaaagaaaatggtattaatgaa
gagaaaaccagttcacttatgaagaataacgaagaaaataaagctgaaagactaaaagag
atgataaatgaatctcaaagagctaagggtgttttagagattatagaaaataataattat
ggatttctaagaggacaaaattatttgtcaggcccagaagatatatatgtatctccatcg
caaataagaagatttaatttaagaacaggtgatgaagttgaaggaaaagttagaatacca
aaggatggagaaaaatttaaagctttaatatatgtagaaagggtaaatggagaaaatcct
gaaaaagcagtaggaagaaaaccttttgaaagcttagtacctatatatcctaatgaaagg
attaaacttgaaacaaattcacaagatttatctacacgactaatggatataatatcacct
ataggtaaaggacaaagaggaatgatagtagcccctcctaaagcaggtaaaactactctt
ctaaaaaagatagcccaaagcatttcccgaaataatccattatgtaaacttatagtactt
ttaattgatgagagaccagaagaagtaacagatatgcaaagatctattaaaggagaagta
atatactcaacctttgatgaagagccagaacatcatacaaaggttacttatatggtttta
gaaagagctaaaagaatggtagagcaaggacaggatgttgttatattattagatagtata
acaagattgtctagagcatataatttaactattacaccaacaggtaggacattatcaggt
gggttagatcctggtgcattagtaatgccaaagaaattttttggtgctgctagaaacatt
gaaaatggtgggagtttaaccatattagctacagctttaactgaaacaggaagcagaatg
gatgatatgatatttgaggagtttaagggtactggaaatatggaagtacatcttaataga
aaacttcaagaaagaagaatattccctgctttagatatttataaatcaggtacaagaaga
gatgatttattgtttacagattctttagaaaaagaaactgcatttaatataagaaagctt
ctttatgaggaaaataatgtagaaaatgtaactgaacaagttttaagtatattatctaaa
actaagactaatgaggaatttgtaaacataataagcaaaatggatatgaataaaaataat
aaataa
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