Clostridium botulinum Ba4: CLJ_B0213
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Entry
CLJ_B0213 CDS
T00895
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbi
Clostridium botulinum Ba4
Pathway
cbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLJ_B0213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbi03400
]
CLJ_B0213
Enzymes [BR:
cbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLJ_B0213
DNA repair and recombination proteins [BR:
cbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLJ_B0213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
Helicase_RecD
DEAD
HHH
PhoH
AAA_22
SLFN-g3_helicase
HHH_2
SRP54
nSTAND3
AAA
DNA_pol_lambd_f
HerA_C
AAA_28
UvrD_C
T2SSE
UvrD-helicase
RsgA_GTPase
AAA_29
AAA_23
HHH_3
AAA_16
ABC_ATPase
ABC_tran
NTPase_1
AAA_5
Cytidylate_kin
AAA_24
DUF6137
NPHP3_N
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ACQ54203
UniProt:
A0A3F2ZTS2
LinkDB
All DBs
Position
199470..201704
Genome browser
AA seq
744 aa
AA seq
DB search
MQEIQGFIEDILFKNDENGYVVAKIRKKKELITIVGCMPYITEGQNLKLKGEWVIHPQFG
NQFKVEICEEIVPNTVAGIERYLSSGIISGIGPVTAKKIVKKFGEETLNILENNIERLTE
IEGIGKKKIEIIYDSYIKQNEVRNIMMFFQNYGVTPNQCMKVYKRFGENSISIVKENPYV
LTEEIRGIGFKTADKIARSLGIASNSPFRIQSGINYIINGFCSLGNTYMPLEKLISEAMD
ILGVREEEIHENIYNNIAENKLKIEKVKEQSCVFTLPYYYCELGVTKKILSLSLSQYDNL
NINIEDEVLNFEKNNNIKFHDSQREAIKGALENGVEIITGGPGTGKTTIINCITEIFEKA
NMKVYMAAPTGRAAKRMSETTGREAKTIHRMLEMGVSDDDTEEVFSKGEETPLECDVVII
DEASMIDIILMNTLLKAIALGTRIIIVGDVDQLPSVGPGNVLRDLIESKCVKVVRLKEIF
RQSKESMIIVNAHRINDGEMPIINKKDKDFYFIECSESKKIVNTLLELSNRRLPKFNKSW
HKIHDIQILSPMRKGILGVSSLNKELQSVLNPKNDSKKEMEFKDYIFRVGDKVMQTKNNY
SLKWTRASGEGEAEGLGIFNGDVGYIEDIDEEKETIQILFDNERRVIYENLYLDEIDLAY
AVTIHKSQGSEFPVVIMPAFKGPPLLMNRNLLYTGITRAKRLVVLVGSLKAINFMVQNDK
IFERYSLLKWRISNVLDTEIINGE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatacagggatttatagaggatatactttttaaaaatgatgaaaatggatat
gtagtggcaaaaataagaaagaagaaagagcttataaccatagtaggatgtatgccctac
ataacagaaggacaaaacttaaaattaaaaggtgaatgggtaattcatccacagtttggc
aatcaattcaaagtagaaatatgtgaagaaatagtacccaatactgtagctggtatagaa
agatatttatcctcaggaattatatcaggtataggcccagtgactgcaaaaaaaattgtg
aaaaaatttggagaagaaacgttaaatatattagagaataatatagaaagattaacagag
atagagggaataggaaagaaaaagatagaaataatatatgattcctatataaaacaaaat
gaagtacgaaatataatgatgttctttcaaaactacggagttacacctaaccaatgcatg
aaagtttataaaagatttggagaaaattctatatcaatagttaaagagaatccatatgta
cttacagaagaaataagaggaataggtttcaagacagcagataaaatagctagaagctta
ggaatagcctctaattcaccctttagaattcagagtggaataaattatataataaatgga
ttctgtagtttaggaaatacttatatgcctttagagaagcttataagcgaggctatggac
atattaggggtaagagaagaagaaatacatgaaaatatatataataatatagcagaaaat
aaattaaagatagaaaaagtaaaagaacaaagctgtgtttttactctaccgtattattat
tgcgaattaggagttacaaaaaaaatacttagcttatctttgtcacaatatgataattta
aatataaatatagaagacgaggtattgaattttgaaaaaaataataatataaaatttcat
gattctcaaagagaagctataaaaggtgccttagaaaatggagtagaaataataacagga
ggccctggtacaggaaaaacaactattattaattgtataacagagatatttgaaaaagct
aatatgaaagtttatatggcagcacctacaggaagagcggctaaaagaatgtctgaaacc
acgggtagagaagctaaaacaatacataggatgttagaaatgggtgtatctgatgatgac
acagaagaagttttttctaaaggtgaagaaactcctttagaatgtgatgtagtaataata
gatgaagcttccatgatagatataatattaatgaatacactgttaaaggccatagcctta
ggtacaagaataataatagttggggatgtagatcaacttccttcagtaggcccaggaaat
gtattaagagatttaatagaaagtaagtgtgtaaaggtagttagattaaaggagatattc
aggcaatctaaagaaagcatgattatagtaaatgcccatagaataaatgatggagagatg
ccaattataaataaaaaagataaagatttttattttatagaatgtagtgaatctaaaaaa
atagttaatacattattagaactttcaaatagaagattacctaaatttaataaaagttgg
cataaaattcatgatatacaaatactatctccaatgagaaagggaattttaggagtttct
agtttaaataaggaattacaatctgttttaaaccctaaaaatgattcgaaaaaagaaatg
gaatttaaggattatatatttagagtaggagataaagttatgcaaaccaaaaacaactac
tctttaaagtggaccagagcaagtggcgagggggaagcagaagggttaggaatatttaat
ggagatgtaggatatatagaggatatagatgaagaaaaagaaacaattcagattttattt
gataatgaaagaagagtaatatatgaaaatttatatttagatgaaatagatttagcttat
gctgtgactattcataaaagtcaaggtagcgaattcccagtagtaattatgccagctttt
aaaggtccaccacttttaatgaatagaaatttattatatacaggaataacaagagcaaaa
aggcttgttgtcttggtaggatctttaaaagctattaattttatggtacagaatgataaa
atttttgaaagatactctcttttaaagtggcgtataagtaatgttttagatactgaaatt
ataaatggagaataa
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