Clostridium botulinum Ba4: CLJ_B0507
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Entry
CLJ_B0507 CDS
T00895
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbi
Clostridium botulinum Ba4
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbi03400
]
CLJ_B0507 (addA)
Enzymes [BR:
cbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLJ_B0507 (addA)
DNA repair and recombination proteins [BR:
cbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLJ_B0507 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
Cullin_Nedd8
Motif
Other DBs
NCBI-ProteinID:
ACQ53258
UniProt:
C3L047
LinkDB
All DBs
Position
524861..528700
Genome browser
AA seq
1279 aa
AA seq
DB search
MSSTKWTDEQRQAIFTKNCNLLVAAGAGAGKTAVLVQRIIEKILDKEEPIDIDKLLVVTF
TNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTIHSFCLQVIKNNFHTIE
IDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESYASRKDIRLQGVVLELHR
FAKSAPFSYDWLLNMAEEFNVGEEFNFEETPWADMIMEDMKVLLHGFKNMLQKSIDVILN
SEGIEYYYEPFKMDLNFINSLLEKLSFKEFRGEIIAYDFPKLPLKRNKDADKEAKERVKK
LRDKVKKRIIELRITLNSYENEFTKKEFIFLYPSMKALSNLVILFDKKYEAKKRERDLID
FNDIEHLCLSILTDKDSKGHIIPSDIALDYRKKFAEVLIDEYQDSNLVQEVIMSMVSRVK
GYWSFYNGQLMFNEEEINLEEPHIGLDIPNRFMVGDVKQSIYRFRQAKPEIFLDKYNEYS
EEEGIKNRKVKLFKNFRSREEVINGVNYLFKQIMSKTIGELDYTEEEALKVGASYGEEVK
GEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQLEGRLVAKKIQKLVGNNLEGGLKVF
DKKLGEYRNLQYRDIVILMRATSNWAPVFVEELAKEGIPVFADTNSGYFDTAEIKTMISL
LQIIDNPLQDIPLLSVLRSPIASFNDDELIDIRMVNKNIAFYECMEIIYRLYKNEKLDSY
YSFYIKDENKINKIIKDMNEKLKNKICSFIEKLKLWREKSINIDIDEFIWFLYMETGYYG
YAGALQAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENE
NVIRIMSIHKSKGLEFPVVILSGTGKNFNMTDLNKNILFHRDLGYGPDYVDTERRIAYPS
LVKNIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKAVESWLNLSDDKNKVP
EYAVMNGKTYLDWIGPAIIKHKDAVSFREELKMSSELSNIVDDKSKWKIELWNKKELLKE
KVEEDEVEISEKIKETLMNLGESNYKEEIYKRLSFKYKYDNASSIPTKLSVSDVKKQFIL
DEKENTEELFKKVELRKPMFMGEKKKISPSERGTIIHLFMQHLDLKKAENKEDIKEQINR
LIEREFITYEQSKVINPYKILKFCRSELGKRMINSNNINREMPFSIEIPAVEIYRELDKN
IYKDEKLIIQGIIDCYFEEEEGLVLLDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGK
TVKDKYLYLFSVDNYIKID
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcactaagtggacagatgagcaaaggcaggctatttttactaagaattgcaac
ttgcttgtggcggcaggggcaggggctggtaagactgctgttttggttcagagaataatt
gaaaaaatattggataaagaggaacctatagatatagataaattattggtagttactttt
actaatgcagctgccgcagaaatgagagagagaataggggatgctatttctaaaggttta
gatgaagacccagagtcaaaggtattaagaaaacaacttaccttattaaataagtcaaat
ataatgactattcactccttttgccttcaagttataaaaaataattttcatactatagaa
atagatcctaattttagaatatgtgatgaaacagaaggaatacttatgaaacaagaagct
atagatgagctttttgatgaattatatgaaatagagaatgaagattttattaatttagta
gaaagctatgccagtagaaaggatattagattacaaggagtggttttagaattacataga
tttgctaaaagtgcaccattctcttatgattggcttttaaatatggcagaggaatttaat
gtgggggaagagtttaattttgaagaaacaccatgggcagatatgattatggaggatatg
aaggtattattacatggatttaaaaatatgctacagaaatctatagatgtaatattaaat
tcagagggcatagagtattattatgaaccctttaaaatggatttaaattttataaatagt
ttacttgaaaaattaagttttaaagaatttagaggtgaaataatagcttatgattttcct
aaattacctttaaaaagaaataaggatgcggataaagaggctaaggaaagggttaaaaaa
ttaagggataaggtaaagaaaaggataatagaacttagaattacattaaattcttatgaa
aatgaatttacaaagaaagaatttatatttctatatccttcaatgaaagcactatccaat
ttagtaatactatttgataaaaaatatgaagctaaaaaaagagaacgggatttgattgat
tttaatgatatagagcatttatgtttatccatattaacagataaggacagtaagggacat
ataattccctcagatattgctttagattatagaaaaaaatttgcagaagtacttatagat
gaataccaagatagtaatttggtgcaagaagttattatgagtatggtatctagagtaaaa
ggatattggagtttttataatggacaattaatgtttaatgaagaagaaataaatttagaa
gaacctcatataggcttagatattcctaatcgatttatggtaggagatgtaaaacaaagt
atttatagatttaggcaggcaaaacctgagatatttttagataaatataatgaatatagt
gaagaagaaggtataaagaatagaaaagtaaagctctttaagaactttagaagcagagaa
gaagtaattaatggtgtaaattatttatttaaacaaataatgtctaaaactataggggaa
ttagattatacagaggaagaagccttaaaggttggagctagctatggagaagaggtaaaa
ggtgaacctatagaattatgtttaatggataaaaagtatgaaataagtgaagaagtatta
aaagaatataatgtggatgaagaagaagctttagataatatacaattagagggaagatta
gtagctaaaaaaatacaaaaattagtaggaaataatttagaaggtggattaaaggtattt
gataaaaagttaggagagtacagaaaccttcaatatagagatatagtgatccttatgaga
gctacatctaactgggcaccagtatttgtagaggaacttgcaaaggaaggcataccagtt
tttgcagatacaaattcgggatattttgatacagcagaaataaaaactatgatatctttg
ctacaaataatagataatcctctgcaagacataccattgctttcagtattaagatcccct
atagcttcttttaatgatgatgaacttattgacataagaatggtaaacaaaaatatagcc
ttttatgaatgtatggaaataatatatagattatataaaaatgaaaagttagattcctat
tatagtttttatattaaagatgaaaataagataaataaaataataaaagatatgaatgag
aaattaaaaaataaaatatgtagttttatagaaaaattaaagctatggagagagaaatct
attaatatagatatagatgaatttatatggtttttatatatggaaactggatattatggc
tatgcaggagcgcttcaagcgggagagcaaagacaggctaatttaaggatactcttccaa
agggcaaagcaatatgcaaaaactagttacaaaggattatttaactttataaattttata
aataagctaaaatttagcagtggagatatgggcagtgccaaaatacttggagaaaatgaa
aatgtaataagaataatgagtattcataagagtaaaggactagaatttccagtagttata
ctaagtggtactggaaaaaattttaacatgacagatcttaataaaaatatattatttcat
agagatttaggatatggaccagattatgtagatacagaaagaagaatagcttatccatcg
ttagttaaaaacattataaaaaataaaataagattagaaaccctatcagaagaaatgcga
atattatatgtagctttaacaagggcaagagaaaagcttataataacaggattgataaat
aatatggataaagctgtagaaagctggttgaatttatcagatgacaaaaataaagttccg
gaatatgctgttatgaatggaaaaacctatttagattggatagggccagctattataaaa
cataaagatgctgtaagttttagagaagagctaaagatgtcatcagagctttctaatata
gtagatgataagtcaaaatggaaaatagaattatggaataaaaaagaattattaaaggaa
aaagttgaagaagatgaagtggaaatcagtgaaaaaataaaggaaacactaatgaattta
ggggaaagtaattataaagaagaaatatataaaagactttcctttaagtacaaatatgat
aacgcctcaagcataccaacaaaattatcagtttcagatgtgaaaaaacaatttatatta
gatgaaaaagaaaatacagaggagttatttaaaaaagtagaacttagaaaacctatgttt
atgggggaaaaaaagaaaatatctccttcagagagaggtactattatacatttatttatg
caacatttagatttaaaaaaggcagaaaataaagaggatataaaagagcaaataaatagg
ttaatagaaagagagttcataacctatgagcaatcaaaggttataaatccatataaaata
ttaaaattttgtagaagtgaattaggaaaaagaatgattaattctaataatataaataga
gaaatgcctttttctattgaaatacctgcagtagaaatttatagggaactagataaaaac
atatataaagatgaaaaattaataattcagggaataatagactgttattttgaagaggaa
gagggactagtattattagattataaaacagattatgttaatgacatagaagaaataaaa
aatagatatgaaatacagattaaatattatgaagaagctttaaatagaataacaggaaaa
actgtaaaagataaatatttatatttattttctgtagacaattatataaaaattgattga
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