Clostridium botulinum Ba4: CLJ_B2648
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Entry
CLJ_B2648 CDS
T00895
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cbi
Clostridium botulinum Ba4
Pathway
cbi03030
DNA replication
cbi03430
Mismatch repair
cbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLJ_B2648 (polC)
03430 Mismatch repair
CLJ_B2648 (polC)
03440 Homologous recombination
CLJ_B2648 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbi03032
]
CLJ_B2648 (polC)
03400 DNA repair and recombination proteins [BR:
cbi03400
]
CLJ_B2648 (polC)
Enzymes [BR:
cbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLJ_B2648 (polC)
DNA replication proteins [BR:
cbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLJ_B2648 (polC)
DNA repair and recombination proteins [BR:
cbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLJ_B2648 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACQ51852
UniProt:
A0A3F2ZQA2
LinkDB
All DBs
Position
complement(2611499..2615797)
Genome browser
AA seq
1432 aa
AA seq
DB search
MENTSVGDLQKEINKEGFDTDKEIKIVRVQYFRKKNKLKIILKSIGNFTKEKEDYIKNIL
KKRFSMVEDFEIICYKDLSNITLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIKDIFGIKCNIKLEYDKSFNEEDYFKTIETIEKS
MIKNALSEIKSKEKKVIRKENSPKTREEENKDTSIILGRSIKEDSIFMKDLNENSGIVVV
CGDVFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPKDADRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSAAKKSNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSSKNDKIIEIGAVKIEKGKIVDRFSEFVNPKRIIPDKITELTSITDDMVQDK
ETIDKILPRFIDFIGDSVVVAHNADFDVSFINKNCKDLKIEFENSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKSFEMLKEKEIITLHNLNKEFLGNIN
IKKEPTYHLIILVKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVKNGSVKDEKELEEINKKICELG
EFYNKPVVATCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDEIKPIPEETFPPKIEGAEEDIRRMTIEKAHAIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCPKCKYSEFFTDGSVGSGADLEDKDCPNCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDEKNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTVLRMLQDLTQVDPKSVPLGDPKVISLFTSPEALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELVRISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKELPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEISYEMYKRGIKFLKVDLYKSNATKFLIEGDSIRPPLSALQGVGKNAA
KSIEESRLEGEFISKEDLRLRTKVTKTVIETLENHGCLRGMQETNQISLFSL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacttcagttggtgatttgcaaaaggaaataaataaagaagggtttgataca
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaaaaata
atactaaaatccattggtaattttactaaagaaaaagaagactatataaaaaatatatta
aagaagagattttctatggtggaggattttgaaataatctgctataaagatctatccaat
attaccctagaggaactttcaaaaaaatattgggtagatatagtgaatttagcttcttct
tctgtccctattgcaagggattgtcttttaaaatctaaaagggaagtgctagaagatagt
ataaatataacctataacaatgaatttttatgtaggtttctttcaaaaaataaattcgaa
ggtaaactgaaatcctatataaaagatatatttggaataaaatgcaatataaaattagaa
tatgataaatcttttaatgaagaagattattttaaaactatagaaactatagaaaagtct
atgataaagaatgctttaagtgagattaagtctaaagaaaagaaagtcattagaaaagaa
aattctccaaagactagggaagaggagaataaggatacttctatcatattaggaagaagt
ataaaagaagatagtatattcatgaaggatttaaatgaaaattctggtatagtagtggta
tgtggagatgtatttaaaaaagaagttatagaaacaaagactgggagaaaaatagtaact
tttttcataacagattacaccaattctatgacagttaagcttttcccaaggcctaaagat
gcagatagaataatagaggaaataaaagaggggatttattgcaaagttagaggagaagta
gtaaatgacccttacgcaagagaatgtgtaataatggctaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcatagtcaa
atgagtgctatggatggaatgactccagtatcagaattagtgaaaagagctgctaaatgg
gggcataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tccgcagctaaaaaaagtaatataaaagtaatatacggaatagaagcttatcttgtagat
gatggagtacctattgtatctaaagcgggggataaaactatagaggatacttttgtagtt
tttgatttagaaactacaggtttttccagtaaaaatgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagataggtttagtgaatttgtaaatccaaaaagg
ataataccggacaaaataacagaacttacaagcataacagatgatatggtacaggataaa
gaaactatagataaaatacttccaagatttatagattttataggagactctgtggtggtt
gctcataatgcagactttgatgtgtcttttataaataaaaattgtaaagatttaaaaata
gaatttgaaaatagtgtaatggatacggtaacactaagcagatttttatttcctgaatta
aaaagatataaattaaatgttatagcaaagcatctaggtatatccttagaaaatcatcat
agagctgtagatgatgctaaagccacagcagatatcttattaaaatcttttgaaatgtta
aaagaaaaagaaataattaccttacataatttaaataaggaatttttaggaaatataaat
ataaaaaaagagcctacatatcatttaataattttggttaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaagtctaatttggagtatttctttaaaagaccaagaatg
gctaaaagtcttataaatgagtataaagaaggacttataataggttctgcctgtgaggct
ggtcaaatatataaagaaatattaaagggaaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagagatacagcctctaggtaataatgaattccttgtaaaaaac
ggttccgtaaaagatgagaaagagcttgaagaaataaataaaaaaatatgtgaattaggt
gagttttataataaacccgtagtagctacttgtgatgtgcattttttagatgaagaacat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcagataatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggggaggaa
aaggctaaagaagtagtaatttataatacaaataagatagcagatatgatagatgaaata
aaaccaattccggaggaaacttttccgcctaaaatagagggagcggaagaagatataaga
agaatgactatagaaaaggctcatgctatatatggagatccacttcctgaaatagtagaa
aaaagattaacaaaggaattaaattctataataaacaatggttacgctgtactttattta
atagctcataagctagtggccaaatcctatgaagatggatatttagtaggatccagagga
tccgttggatcttcctttgcagctactatgtcagatattacagaagttaatggattacca
cctcattatgtttgtcctaaatgtaaatatagtgaattctttacggatggatctgtaggt
tcaggagcggatttagaggataaggattgtccaaattgcggaactaaattaataaaagat
ggtcatgatataccttttgaaacttttttaggtttcgaaggggataaagaaccagatata
gatttaaatttttcaggagaatatcaaggagtagttcataaatatacagaagttctattt
ggaaaagggcatgtttttaaagcaggaactattggtactatagcagaaaagactgcctat
ggttttgtaaaaaaatatttagatgaaaagaatataaaagctaacaatgcagaaatagaa
agattatccaaaggatgtacaggagttaaaagaacatcaggacagcatccaggaggaatt
atggttgtgcctgcagataatgaaatatttaactttacccctatacaacatccagcagat
gatacagaaagtgatgttataactacccattttgattatcattctataagtggtagactt
ttaaaattagatatattaggtcatgacgaccctacagtacttagaatgcttcaggatttg
actcaggtagatcctaaatctgtacctctaggagatccaaaggttataagtttatttaca
tcaccagaggctttaggggttacagaggaggatatagattgtcctgtaggaacttatggc
cttccagagtttggaactaaatttgtaagacaaatgttattagatacaaaaccaaaaagt
tttgcagaattggtaagaatatcaggattatcccatggtacagatgtatggcttaataac
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagat
gatataatggtatatttacttcaaaaggaactgccaccgaagagtgcttttacaataatg
gaaaaagtgagaaagggtaaaggccttacagaggaacaggaagctttaatgaaagaacac
gatgtgccagattggtatatagagtcctgtaagaagataaagtatatgttccctaaaggt
catgctgtagcctatgtaatgatggccatgagaatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcggatgattttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgccatgggcaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatcttatgaaatgtataaa
aggggtataaagtttttaaaggtagatttatataaatctaatgctactaaatttttaata
gaaggagatagtataagaccacctttaagcgctcttcaaggagtagggaaaaatgcagct
aaaagtatagaagaatctagattagagggcgaatttatatcaaaagaagatttaagatta
agaactaaggttacaaaaactgttatagaaactttggaaaatcatggttgtttaagagga
atgcaggaaactaatcaaatatccttatttagcctttag
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