Clostridium botulinum Ba4: CLJ_B3143
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Entry
CLJ_B3143 CDS
T00895
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
cbi
Clostridium botulinum Ba4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
SpoVT_C
AAA
AAA_5
nSTAND3
GAF_2
Mg_chelatase
AAA_7
AAA_2
AAA_16
GAF
AAA_14
Imm40
DUF815
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ACQ54299
UniProt:
A0A3F3A431
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Position
complement(3152797..3154560)
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AA seq
587 aa
AA seq
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MKGSTLLEIQDTVAKYANIISSVIKVDVEIVDKNLCRIAGTGIYKDAINKDISKEGYVYD
YVIKTGEKQIIKNPGQHYLCKKCNHRNNCLEKMLVCTPIILNDDIIGVIGLVCSEDSQRN
HFIENFDSYIQMLYQISDFISTKSYEHLEIERSHMMVDLLNQIIDSVDKGVLVTKNNEIV
HMNTSAMKQLKLKANNTNKKITISSTSEYIMGGEVYTIVIDNEKFQLMGRIIPVFPVLSA
YDTIFVFEEIKHLKSKICKVSGGREVIKVEDIIGESQAMVQLKNRIKKIASSSSTVLITG
ESGTGKEVIARAIHCESDKNTNPFIAINCGAIPDALLESELFGYVRGAFSGADPNGRVGK
FELANKGIIFLDEIGDMPLYLQVKILRVLQERKLVRIGSNHLIDLDIRVIAATNKDLKKL
IKENKFREDLYYRLNVIPLKIPPLRERKEDIELLMEMLIKKYNGLFGKSVYKIDKECKDI
LINYPWYGNVRELENAVEFMINMADDSGIVTMNMLPPSIVENKNPQIYGAGIGEDIRPLK
EIEKEYILRALDIYGHDTRGKQLAAKRLGIGIATLYRKLEEMKNLSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttctacattattagaaattcaagatacagttgctaagtatgcaaatataatt
tcaagtgtaataaaagtggatgttgaaattgtagataaaaatttgtgtagaatagcaggg
actggtatttataaagatgcaataaacaaagatatatcaaaagaaggatatgtatatgat
tatgttataaaaactggagagaagcagataataaagaatccaggacaacattatctgtgt
aaaaaatgtaatcatagaaataattgcctagagaaaatgcttgtgtgtacgcctataata
ttaaatgatgatattataggggtaataggacttgtgtgttcagaggatagtcaaagaaat
cattttatagaaaattttgattcatatattcaaatgttatatcaaatatcggattttata
agcactaaatcatatgaacatcttgaaattgaaagaagtcatatgatggtagatttgtta
aatcaaataatagatagtgtagataaaggggttctagttactaaaaacaatgaaatagtt
catatgaacacaagtgctatgaagcaacttaagctgaaagctaataatacgaataaaaaa
ataacaatatcttctactagtgaatatataatgggaggggaagtatatactattgtcata
gataatgaaaagtttcaacttatgggtaggattatacctgttttcccagtattatcagcc
tatgatacaatatttgtgtttgaggaaataaagcacttaaaatcgaaaatatgcaaagtt
agtggaggaagagaagttataaaggttgaggatattatcggtgagtcacaagctatggtt
caacttaaaaataggattaaaaagattgcttcctcaagttctacagttctcataactgga
gaaagtggcactgggaaagaagtgattgcacgtgccatacattgtgaaagtgataaaaat
acaaatccctttatagctataaactgtggagccataccagatgctcttttagaaagtgaa
ttatttggatatgtaagaggtgcttttagtggagcagatccaaatggaagagtaggtaaa
tttgaattagcaaacaagggaataatatttttagacgaaataggagacatgcctttatat
ctgcaggttaaaatactaagggtactccaggaaagaaaattagtaagaataggatctaac
catcttatagatttagatataagagttatagcggctactaacaaggatttaaaaaaatta
ataaaagaaaataaatttagggaagatttatattatagactaaatgttattccattaaaa
ataccacctttaagagagcgaaaagaagatatagaacttcttatggaaatgttaataaaa
aaatataatggattatttggtaaatctgtttataaaattgataaagagtgtaaagatatt
ttgataaattatccttggtatggtaatgtaagagaacttgaaaatgctgtagaatttatg
ataaatatggcagatgatagtggtatagtaactatgaatatgcttccacctagtatagtt
gagaataaaaatcctcaaatttatggtgcaggtataggtgaagatataagacctttaaaa
gagatagagaaagagtatattttaagagctttagatatatatggacatgatactagaggt
aaacaactggcggcaaagcgtttaggaataggtatagctaccctatatagaaaattagag
gagatgaagaatttatcaaaatga
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