Clostridium botulinum Ba4: CLJ_B3554
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Entry
CLJ_B3554 CDS
T00895
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cbi
Clostridium botulinum Ba4
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbi03009
]
CLJ_B3554
Enzymes [BR:
cbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CLJ_B3554
Ribosome biogenesis [BR:
cbi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLJ_B3554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACQ52236
UniProt:
A0A3F2ZTV8
LinkDB
All DBs
Position
complement(3550716..3551432)
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AA seq
238 aa
AA seq
DB search
MERLDKILANLGYGTRKEVKALIKKGQVDVDGEVVKDNGMQIDPEKNKIFVFGKELVYKK
YIYLIMNKPQGVVSATFDNYDETVVDLLEDEDRIFEPFPVGRLDKNTVGLLLLTNDGELN
HRLISPKWHVDKIYYAKINKKVTDEDIKKFKKGIILDDGYECFPAKLEIIKSFNEESEVR
VTIHEGKFHQVKRMFESVDKKVIYLKREEFGPLKLDESLEEGQYRELTDEEICILKNL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttagataaaatactagccaatttaggatatggtacaagaaaagaagttaag
gctttgattaaaaaagggcaagttgatgttgatggtgaagttgttaaagataatggtatg
caaatagatccagaaaaaaataaaatatttgtatttggaaaagaattagtttataaaaaa
tatatttatttaataatgaataaaccccaaggggtagtttctgcaacttttgataactat
gatgaaactgttgtagatttgttagaagatgaagacagaatttttgaaccttttcctgtg
gggaggttagataaaaatacagtaggcttacttttacttactaacgatggtgagttaaat
cacagacttatatctcctaaatggcatgtggataaaatatattatgccaaaattaataaa
aaagttactgatgaagatataaagaaatttaaaaagggtataatattagatgatggttat
gaatgctttcctgcaaagcttgaaataataaaatcatttaatgaggaatcagaagtaaga
gttactatacatgaaggtaaatttcatcaagtcaaaagaatgtttgaaagtgttgataaa
aaggttatttacttaaaaagagaagaatttggaccattaaaattagatgagagcttagaa
gagggtcaatatagggaattaacagatgaagaaatatgtatattaaaaaatctataa
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