Claveliimonas bilis: EUBC25_00500
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Entry
EUBC25_00500 CDS
T09374
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbil
Claveliimonas bilis
Pathway
cbil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUBC25_00500 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbil03019
]
EUBC25_00500 (pnp)
03016 Transfer RNA biogenesis [BR:
cbil03016
]
EUBC25_00500 (pnp)
Enzymes [BR:
cbil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EUBC25_00500 (pnp)
Messenger RNA biogenesis [BR:
cbil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EUBC25_00500 (pnp)
Transfer RNA biogenesis [BR:
cbil03016
]
Prokaryotic type
tRNA degradation factors
EUBC25_00500 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
KH_5
Motif
Other DBs
NCBI-ProteinID:
BCZ25963
LinkDB
All DBs
Position
complement(41672..43759)
Genome browser
AA seq
695 aa
AA seq
DB search
MYKKYEMELAGRTLCVDVDRVAKQANGAVLMHYGDTTVLCTATASEKPREGIDFFPLSVE
YNERMYAVGKIPGGFNKREGKASENAILTCRVIDRPMRPLFPKDYRNDVTLENLVLSVDQ
DCSPELTAMLGAAIATCISDIPFDGPISTTQVGLVDGEFVFNPTAAQKEVSELSLTVAST
KEKVIMIEAGANEVPEERMIEAIYAAHELNQKVIAFIDQIVAECGKPKHSYESFAVPEEL
FAAIREIVTPQEMEEAVFTDDKQTREENIRQITDRLEEAFADNEEWLAKLPEAVYQYQKK
TVRKMILKDHKRPDGRAIDQIRPLSAEIDLIPRVHGSAMFTRGQTQICTITTLAPLAEAQ
RLDGLDEAETSKRYMHHYNFPSYSVGETRPSRGPGRREIGHGALAERALVPVLPDENEFP
YAIRTVSETFESNGSTSQASICASSMSLMAAGVPIHSAVAGISAGLVTGDTDDDYLVLTD
IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTRPIIEEAIAATKKARTYILDEVMSK
AISEPRPEVGPYAPKIIQMQIDPQKIGDVVGQRGKTINAIIEETGVKIDITDDGAVSICG
TEAKGMERAKRLIEIIVSDFEAGQVLEGKVVSIKEFGAFLEFAPGKEGMVHISKLSKERV
KQVEDVLTLGDVVKVVCLGKDKMGRFSFSMKDVAE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagaagtatgaaatggaattagccggaagaactctgtgcgtggatgtagacaga
gtggcaaagcaggcaaacggtgcggttttaatgcactatggggatacgacagtgctgtgt
acggccacagcgtcagaaaagccgcgtgagggaattgatttctttcccttaagtgtagaa
tataatgagagaatgtacgcagttggaaagatcccgggaggatttaacaaacgtgagggg
aaagcatctgaaaatgcgatccttacctgccgtgtgattgaccgcccgatgcgtcctctt
ttcccaaaagattaccggaatgatgttacactggaaaatcttgtgttgtctgtagatcag
gactgctcaccggagcttacagctatgctgggagcagcaattgcaacctgtatttcagat
attccttttgacggtccgatttccactactcaggtaggactggttgatggagaatttgta
ttcaatccgacagcagcacagaaggaagtttcagaactttcccttaccgttgcttctacg
aaggaaaaggtgatcatgatcgaagcaggagcaaacgaagttccggaagagcgcatgatc
gaggcaatctatgcagctcatgagctgaatcagaaggtgatcgcatttattgatcagatc
gtggcagaatgcggtaagccgaagcattcctatgaaagctttgcagttccggaagaactg
tttgcagcgatccgggagatcgtaactccgcaggagatggaagaagcagtcttcacagat
gacaaacagacaagagaggaaaacatccgccagattacagatagactggaagaagccttt
gcagataatgaagagtggctggcaaaacttccggaggcagtatatcagtatcagaagaaa
acggtacgtaagatgatcctgaaagatcataagcgtccggacggaagagcaattgaccag
atccgtcctctttcagcagagatcgacctgatcccaagagtacacggttctgctatgttt
acaagaggacagacacagatctgtactattacgactctggctcctcttgcagaggcacag
agactggatggcctggacgaggcagagacatccaagcggtatatgcatcactataatttc
ccgtcctactctgtaggtgagacaagaccgtccagaggaccgggacgtcgtgagatcggc
catggggctttagcagagcgcgcccttgttccagtacttccggatgaaaatgaatttcca
tatgcgatccgtactgtatcagagacattcgaatccaatggatccacttcacaggcaagt
atctgtgcatcatccatgtctctgatggctgccggagtaccgatccattctgcagttgca
ggaatttccgcaggtctcgtgacaggagatacagatgacgattatcttgtactgaccgac
atccagggactggaagacttctttggagacatggacttcaaggtggctggtacacataag
ggtattacagcaatccagatggatattaagatccatggattgacaagaccgatcattgag
gaagcaatcgccgctacaaagaaagcgcgtacctatattcttgatgaggttatgtcaaag
gcaatcagcgagccgagaccggaagtgggaccgtatgctccgaagatcatccagatgcag
atcgatcctcagaagattggcgatgtagtaggccagagagggaagacaatcaacgctatt
attgaggagactggagttaagatcgatatcacagacgatggcgctgtatccatctgcgga
acagaagcaaaaggaatggagagggcgaaacgtctgatcgagatcatcgtcagtgatttt
gaagccggacaggtactggaaggcaaagtggtcagcatcaaagaatttggtgcattcctt
gagtttgccccaggtaaagagggaatggttcacatttccaagctttccaaagaacgagta
aaacaggtggaagatgtactgacacttggagatgtagtaaaggttgtatgccttggaaaa
gataagatgggacgtttctccttcagcatgaaggacgttgcagaataa
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