Claveliimonas bilis: EUBC25_03170
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Entry
EUBC25_03170 CDS
T09374
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbil
Claveliimonas bilis
Pathway
cbil03410
Base excision repair
cbil03430
Mismatch repair
cbil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUBC25_03170 (recJ)
03430 Mismatch repair
EUBC25_03170 (recJ)
03440 Homologous recombination
EUBC25_03170 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbil03400
]
EUBC25_03170 (recJ)
DNA repair and recombination proteins [BR:
cbil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EUBC25_03170 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EUBC25_03170 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EUBC25_03170 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BCZ26230
LinkDB
All DBs
Position
complement(318932..320698)
Genome browser
AA seq
588 aa
AA seq
DB search
MERWVLLRKGADFKSISRKFHISPYLAVLVRNRGIIGDQAIQDYLYGTIADLYDGMLMKD
MDKAVEILLEKIREGARIRIIGDYDIDGVNATYILMEGLRGLGAVVDIDIPDRMTDGYGI
NQNLIDRAKEAGADTIITCDNGIAAAEEIAYGKSLGMTIVVTDHHEIPYREENGERKYVL
PPADAVVDPKRADCLYPFKGLCGAAVAYKLMEALYEASGKDSADIDYLMEEVAIATVGDV
MDLTGENRIFVRQGLEMLQSTSNLGLKALMECTKIDPARISSYHIGFVMGPCMNASGRLD
TAKRALELLDAGTKAEADILAGDLKALNDSRKDMTEDAVKQAMELVEQTAAGRDKVLVLY
LPKCHESLAGIVAGRIREYYYKPVFVLTDSGEEVKGSGRSIEAYHMYEELNKCSALLTRF
GGHKLAAGLSLPRKNVERFRQGINAVCTLKEEDMQEKVSIDMELPFAQVTEEFIKELELL
EPFGKGNPKPVFAQRQVEVLAARLIGKKRNMLRMQVRDSYGTSMEAVYFGDALAYLDEVE
RHYGAEVKRDFFAGACQRIRMSVTYYPGINEYMGEKRVQITLTHYQIT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttgggttttacttagaaagggagcagattttaaaagtatcagcagaaaattc
catatcagtccctatctggcagtacttgtaagaaaccggggaattatcggagatcaggca
atacaggattatctctatggaacgattgccgatctgtatgatgggatgctgatgaaagat
atggacaaagcggtagagattcttttggaaaagatccgggagggagccagaatccgtatc
atcggggattatgatattgatggagtaaatgcgacttatatattgatggaaggcctgcgg
ggacttggggcagtagtagacattgatattccggaccgcatgacagatggttacgggatc
aatcaaaatctcattgaccgggcaaaagaagccggggcagacacgatcataacctgtgac
aatggaattgcagcagcggaggagattgcctatggaaagagccttgggatgaccattgtt
gtgacagatcatcacgagattccctaccgggaggaaaatggggagagaaagtatgtcctt
cctccggctgatgcagtggtggaccctaagagagcggactgcctctatcccttcaagggg
ctgtgcggagcggctgttgcctataaactgatggaagctttgtatgaagcttcggggaaa
gattcggcagatatcgattatctgatggaagaagtggcgattgcaacagtgggagatgtg
atggatcttacaggggagaatcggatctttgtcaggcagggactggaaatgctgcagtct
acctctaatctgggactgaaagctcttatggaatgtacaaagatcgatcctgccagaatc
agcagctatcatatcggctttgtcatgggaccctgcatgaatgcaagtggaaggctggat
acggccaaaagagcgctggagcttctggatgccggaacaaaggcggaagcggatattctg
gcaggagatctgaaagcgttgaatgacagcaggaaagatatgacagaggacgcagtaaag
caggccatggaactggtagaacaaacagcagcagggcgggacaaagtacttgtcctttat
ctgccaaagtgccatgaaagtctggccgggattgtggcggggcgtatcagggaatattat
tataagccggtttttgtactgacagattcaggagaggaagtaaaaggttccggacgttcc
atcgaagcctatcatatgtatgaagagctgaataagtgcagcgctcttctgacgcggttc
ggaggtcataaactggcagcaggactgtctcttccaagaaaaaatgtagagcggttccgt
cagggaatcaatgcagtctgtactttgaaagaggaggacatgcaggaaaaggtatccatt
gatatggagcttcctttcgcacaggtgacagaagagtttataaaggaactggagctgttg
gagccttttggaaaagggaatccgaaaccggtttttgcgcaaagacaagtggaagttctc
gcagctcgtctgatcggaaagaagagaaacatgctgcggatgcaggtgagggacagctat
ggtacttctatggaggcagtatattttggagatgctttggcttacttggatgaagtggaa
cggcattacggagcggaggtaaagagggacttttttgccggggcctgtcagaggatacgt
atgtccgtcacttattatccgggtatcaatgaatatatgggagagaagagggtacagatt
acgctgacccattatcagatcacgtaa
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