Claveliimonas bilis: EUBC25_10410
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Entry
EUBC25_10410 CDS
T09374
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbil
Claveliimonas bilis
Pathway
cbil03030
DNA replication
cbil03430
Mismatch repair
cbil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUBC25_10410 (dnaE)
03430 Mismatch repair
EUBC25_10410 (dnaE)
03440 Homologous recombination
EUBC25_10410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbil03032
]
EUBC25_10410 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbil03400
]
EUBC25_10410 (dnaE)
Enzymes [BR:
cbil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUBC25_10410 (dnaE)
DNA replication proteins [BR:
cbil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EUBC25_10410 (dnaE)
DNA repair and recombination proteins [BR:
cbil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EUBC25_10410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BCZ26954
LinkDB
All DBs
Position
complement(1047578..1051078)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSFAHLHVHTEYSLLDGSNKIKECVSRVKELGMNSVAITDHGVMYGVIDFYRAAKAEGIK
PIIGCEVYVAPGSRFDREARGSDESRYYHLVLLAENDQGYHNLMKLVSRGFTEGYYYKPR
VDMELLERYHEGLIALSACLAGEVSRNILRGMYEEGKEAALRYEKIFGKGNFFLELQDHG
IAQQTMVNQALLRMSQETGIGLVATNDIHYTYADDVKPHDILLCLQTGKKLADEDRMRYE
GGQYYIKSEEEMKELFPYALEALENTQKIADRCNVEIEFGVTKLPKYDVPDGYTSWEYLN
KLCFEGLEERYGVKGGEHKGEVDQELKDRLTYELSIIHDMGYVDYFLIVWDFIKYARDHK
IMVGPGRGSAAGSIVSYCLGITSIDPIKYQLLFERFLNPERVSMPDIDVDFCFERRQEVI
DYVVRKYGSDRVVQIVTFGTMAARGVIRDVGRVMDLPYAFVDSIAKMIPKELNITLDKSL
SMNPELKKLYEEDGQVRELIDMSKRLEGLPRHTSMHAAGVVISQKEVDEYVPLSLGSDGS
VTTQFTMTTLEELGLLKMDFLGLRTLTVIQNAVDLAEKSTGTQIDINAIDFNDQEVLESI
GSGRTDGVFQLESAGMKSFMKELKPKSLEDIIAGISLYRPGPMDFIPQYIKGKNSTGEIT
YDCPQLEPILAPTYGCIVYQEQVMQIVRDLAGYTLGRSDLLRRAMSKKKGDVMQKERQNF
VYGNPDEGVPGCVNNGIDEKTANKIYDEMIDFAKYAFNKSHAAAYAVVSYQTAYLKYYYP
VEFMAALMTSVIENPPKVAEYIYSCRQMGIEILPPDINRGEGNFSVDEGNIRYGLAAIKS
IGRPVIQEIIEEREIGGEFKSLKDFIERMSGKDVNKRSIENFIKAGAFDGLGGTRKQFMS
IYIQILDQVNQERKTSMAGQMSLFDLVGEEQKSEFDIPLPDVGEYDKETKLAFEKEVIGV
YLTGHPLEDYEEKWRKNISKTTLDFQIDDSTGRARVYDGAKETVGGMITAKTIKHTKNNK
MMAFLTLEDLVGNVEIVVFPRDYEKNQRLLNEESKVFIRGRVSEEDDAPSKLICETVIPF
EQTKRELWIQYPDKAAYMEDESHLFELLKASDGDDTVVIYCRAEKAVKRLPAGRNIYIEP
GILSRLTNYFGESCVKVVEKPIESIR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcacatctgcacgtccatacggaatacagccttctggacggttcaaacaaa
ataaaagaatgtgtgtcaagggtaaaagagctggggatgaacagcgttgccatcaccgac
catggcgttatgtacggcgtcattgatttttaccgcgcggcaaaggcggaagggatcaaa
cctattatcggctgtgaagtctatgtggcgccggggtccagatttgacagagaggccaga
ggaagtgatgagagcaggtattatcatcttgtgcttctggcggagaatgaccagggctat
cataatctgatgaagctggtttccaggggatttacggaagggtattattataaaccccgt
gtggatatggagcttttggaacgctatcatgaagggctgattgccttgagcgcctgcctg
gcaggagaagtttcaagaaatattctcaggggcatgtatgaggagggcaaggaagctgcc
cttcgctatgagaaaattttcggcaaaggcaacttcttcctggagcttcaggatcatggg
attgcccagcagaccatggtaaatcaggctctgctgcggatgagtcaggagacagggatc
ggccttgtggcgacaaatgatatccactatacttatgcggatgacgtaaaaccgcatgat
atccttctgtgtcttcagaccggcaagaaactggcagatgaggaccggatgcgatatgag
ggcggacagtactacatcaaatccgaagaagagatgaaggagctgtttccctatgcgctg
gaagcgctggaaaatacacagaaaatcgctgacagatgcaacgtggaaattgagttcggg
gtgacgaaacttccgaaatacgacgtcccggacggctatacttcctgggaatatctgaac
aagctctgctttgaaggactggaagaaagatatggtgtgaaaggcggagagcacaaagga
gaggtggatcaggagcttaaggatcgtctgacctatgagctgtccatcattcacgatatg
ggatacgtggattattttctgatcgtctgggattttattaagtatgcaagagatcacaag
atcatggtggggccggggcgtggatcggcagcgggaagtatcgtttcctattgccttgga
attaccagtatcgaccctattaagtatcagctgctgtttgagcgtttccttaacccggag
cgagtgtctatgccggatattgatgtggatttctgtttcgagagacgtcaggaagtcatc
gactatgtggtaagaaaatacggctccgaccgggtggtgcagattgttacttttggtacg
atggctgcaagaggagtcattcgggatgtagggcgtgtgatggatctgccctatgctttt
gtggacagtattgcgaaaatgattccgaaggaattgaacattactctggataaatctctg
tctatgaatccggaattaaagaaactgtacgaggaggacgggcaggtacgggagctgatc
gatatgtcaaaaaggctggaaggtcttccgagacatacatccatgcatgccgcgggcgtg
gtgatcagccagaaagaagtggatgagtatgtgcctctctctcttggttcagacggttcg
gtaaccacacagtttacgatgacgaccctggaagagctgggactccttaaaatggatttc
ctcggccttcggacgctgactgtaatccagaatgcagtggatctggcggaaaagagtacc
ggaacacagattgatattaatgcaattgattttaatgaccaggaagtgctggagtctatc
ggaagcggtcggacagacggtgtgttccagcttgaaagtgcggggatgaaaagcttcatg
aaggagctgaagccaaagagcctggaagatattatcgctggaatttctctttatcgtccg
ggaccgatggattttattccccagtatatcaaagggaagaacagcacaggagagattacc
tatgactgcccgcagcttgagccgatcctggcgcccacatacggatgtattgtttatcag
gaacaggttatgcagattgtgcgtgatctggccggttacactcttggaagaagcgacctt
ttgagaagagctatgtccaagaaaaagggcgatgtgatgcagaaagagcgccagaacttt
gtgtatgggaatcctgatgaaggggtgcccggatgcgtcaacaatggaatcgacgaaaaa
acagccaacaaaatttatgatgagatgattgattttgcaaaatatgccttcaataagtct
catgcggcggcatatgctgttgtttcttatcagactgcttatctgaaatattattatccg
gtagaatttatggcggctcttatgacatccgtgattgaaaatccgccgaaagtggcagaa
tatatttacagctgccggcagatgggaattgaaatccttcctccggatatcaacagagga
gaagggaatttctctgtggatgaaggaaatatccggtatgggctggcggcgatcaagagc
atcggacgtccggtgatccaggaaattattgaggagagggaaatcggcggagaatttaag
agcctgaaagattttattgaacgaatgtccggaaaggatgtcaataaacgcagtatagaa
aactttatcaaggcaggtgcatttgacggacttggcggaacccggaagcagtttatgagt
atctacatccagattctggatcaggtaaaccaggagagaaaaacctccatggcagggcag
atgtctctctttgatcttgtgggggaagagcagaaaagcgaatttgatattcctcttcct
gatgtgggagaatatgataaagaaacgaagcttgctttcgaaaaagaagtgatcggggta
tatctgacaggacatccgctggaggattatgaagaaaaatggcggaaaaatatttccaag
actacactggatttccagattgacgattccaccgggcgggcgagagtgtatgatggtgcc
aaggaaacggtgggcggtatgatcactgccaaaaccataaaacatacaaagaacaataag
atgatggcttttctgactctggaagatctggtgggaaatgtggagattgtcgttttccca
agggattatgaaaagaatcagcgtcttttaaacgaggaaagcaaggtattcatccgggga
agagtatcggaagaagacgatgctcccagtaagctgatctgtgagacggttattcccttt
gaacagacaaagagggagctgtggatccaatatccggacaaggcggcctatatggaagat
gaatcccatctttttgaactgctgaaggcctctgatggcgacgatacagtcgtgatatac
tgcagggcagaaaaagcagtgaaaagacttccggcggggcggaacatctatattgaaccc
gggattctaagcagattgacgaattatttcggagaatcttgtgtaaaagttgtagaaaag
cccattgaaagcataagatag
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