Clostridium botulinum H04402 065: H04402_00454
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Entry
H04402_00454 CDS
T02076
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbj
Clostridium botulinum H04402 065
Brite
KEGG Orthology (KO) [BR:
cbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbj03400
]
H04402_00454
Enzymes [BR:
cbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H04402_00454
DNA repair and recombination proteins [BR:
cbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H04402_00454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
PDDEXK_1
AAA_12
Cullin_Nedd8
Cystatin
Motif
Other DBs
NCBI-ProteinID:
CBZ02269
LinkDB
All DBs
Position
550486..553323
Genome browser
AA seq
945 aa
AA seq
DB search
MKALSNLVILFDKKYEAKKRERDLIDFNDIEHLCLSILTDKNSDGHIIPSDIALNYRKKF
AEVLIDEYQDSNLVQEVIMSMVSRVKGYWSFYNGQLIFNEEEISLEEPQIGLDIPNRFMV
GDVKQSIYRFRQAKPEIFLDKYNEYNEEEDRKNRKVKLFKNFRSREEVINGVNYLFKQIM
SKTIGELDYTEEEALKIGASYGEEVKGEPIELCLMDKKYEISEEVLKEYNVDEEEALDNI
QLEGRLAAKKIQKLVGNNLEGGLKVFDKKLGEYRNLQYRDIVILMRATSNWAPVFVEELA
KEGIPVFADTNSGYFDTAEIKTMISLLQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRM
VNKNITFYECMEIIYRLYKNEKLDSYYSFYIEDENKINKIIKDMNEKLKNKICSFIEKLK
LWREKSIHIDIDEFIWFLYVETGYYGYAGALQAGEQRQANLRILFQRAKQYAKTSYKGLF
NFINFINKLKFSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILSGTGKNFNMTDLN
KNILFHRDLGYGPDYVDTERRIAYPSLVKNIIKNKIRLETLSEEMRILYVALTRAREKLI
ITGLINNMDKTVEDWLNLSEDKNKVPEYAVMSGKTYLDWIGPALIKHKDAVSFREELKMT
SELSNIVDDKSKWKIELWNKRELLKEKVEEDEVEISEKIKETLMNLEESNYKEEIYKRLS
FKYKYDNASSIPTKLSVSDVKKQFILDEKENTEELFKKLELRKPMFMEEKKKISPSERGT
IIHLFMQHLDLKKAENEEDIKEQINRLIEREFITYEQSKVINPYKILKFCRGELGKRILN
SNNVNKEMPFSIEIPALEIYKELDKEIYKDEKLIIQGVIDCYFEEEDGLVLLDYKTDYVN
DIEEIKNRYEIQIKYYEEALNRITGKNVKDKYLYLFSVDNYIKID
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactatccaatttagtaatactatttgataaaaaatatgaagccaaaaaaaga
gaacgagatttgattgattttaatgatatagagcatttatgtttatccatattaacagat
aagaatagtgatgggcatataattccatcagatattgctttaaattatagaaaaaaattt
gcagaagtacttatagatgaatatcaagatagtaatttggtacaagaagttattatgagt
atggtatctagagtaaaaggatattggagtttttataatggacaattaatatttaatgaa
gaagaaataagtttagaagaacctcagataggcttagatattcctaatcgatttatggta
ggagatgtaaaacaaagcatatatagatttagacaggcaaaacctgagatatttttagat
aaatataatgagtataatgaagaagaagatagaaagaatagaaaagttaagctctttaag
aactttagaagcagggaagaagtaattaatggtgtaaattatttatttaaacaaataatg
tctaaaactataggggaattagattatacagaggaagaggccttaaagattggggctagc
tatggagaagaggtaaaaggtgaacctatagaattatgtttgatggataaaaagtatgaa
ataagtgaagaagtattaaaagaatataatgtggatgaagaagaagctttagataatata
caattagagggaagattagcagctaaaaaaatacaaaaattagtgggaaataatttagaa
ggtggattaaaggtatttgataaaaagttaggagagtacagaaaccttcaatatagagat
atagtgattcttatgagagctacatctaactgggcaccagtatttgtagaggagcttgca
aaggaaggcataccagtttttgcagatacaaattcaggctattttgatacggcagaaata
aaaactatgatatctttattacaaataatagataatcctctgcaagacataccattgctt
tcagtattaagatcccctatagcttcttttacagatgatgaacttattgacataagaatg
gtaaacaaaaatataaccttttatgaatgtatggaaataatatatagattatataaaaat
gaaaagttagattcttattatagtttttatattgaagatgaaaataagataaataaaata
ataaaagatatgaatgagaaattaaaaaataaaatatgtagttttatagaaaaattaaag
ctatggagagagaaatctattcatatagatatagatgaatttatatggtttttatatgtg
gaaactggatactatgggtatgcaggagcgcttcaagcaggagagcaaagacaggctaat
ttaaggatacttttccaaagggcaaagcaatatgcaaaaactagttacaaaggattgttt
aactttataaattttataaataaattaaaattcagtagtggagatatgggcagtgcaaaa
atacttggagaaaatgaaaatgtagtaagaataatgagtattcataagagtaaaggatta
gaatttccagtagttatactaagtggtactggaaagaattttaatatgacagatcttaat
aaaaatatattatttcatagagatttaggatatggaccagattatgtagatacagaaaga
agaatagcttatccatcgttagttaaaaacattataaaaaataaaataagattagaaact
ttatcagaagagatgcgaatattatatgtagctttaacaagggcaagagaaaaacttata
ataacaggattgataaataatatggataaaactgtagaagactggttgaatttatcagag
gacaaaaataaagtaccagaatatgctgttatgagtggaaaaacttatttagactggata
ggtccagctcttataaaacataaggatgctgtaagttttagagaagagttaaaaatgaca
tcagagctttctaatatagtagatgataagtcaaaatggaaaatagaattatggaataaa
agagaattattaaaagaaaaggttgaagaggatgaagtggaaattagtgaaaaaataaaa
gaaacattaatgaatttagaagaaagtaattataaagaagaaatatataaaagactttcc
tttaagtacaaatatgacaatgcttcaagcataccaacaaaattgtcagtttcagatgtg
aaaaaacaatttatattagatgagaaggaaaatacagaggagttatttaaaaaactagaa
cttagaaaacctatgtttatggaagaaaaaaagaaaatatctccttcagagagaggtact
attatacatttatttatgcaacatttagatttgaaaaaggcagaaaatgaagaggatata
aaagaacaaataaataggttaatagaaagagagttcataacctatgagcaatcaaaggtt
ataaatccatataaaatattaaaattttgtagaggtgaattaggcaaaagaatacttaat
tctaataatgtaaataaagaaatgcctttttctatagaaatacctgcattagaaatttat
aaagagttagataaagaaatatataaagatgaaaaattaataattcaaggggtaatagac
tgttattttgaggaagaggatggattagtattattggattataaaacagattatgttaat
gacatagaagaaataaagaatagatatgaaatacagattaaatattatgaagaagcctta
aatagaataacaggaaaaaatgtaaaagataaatatttatatttattttctgtagacaat
tatataaaaattgattga
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