Clostridium botulinum H04402 065: H04402_00492
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Entry
H04402_00492 CDS
T02076
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbj
Clostridium botulinum H04402 065
Brite
KEGG Orthology (KO) [BR:
cbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbj03400
]
H04402_00492
DNA repair and recombination proteins [BR:
cbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H04402_00492
Archaeal homologous recombinant proteins
H04402_00492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ATP_bind_1
GFO_IDH_MocA_C2
Motif
Other DBs
NCBI-ProteinID:
CBZ02306
LinkDB
All DBs
Position
587704..591240
Genome browser
AA seq
1178 aa
AA seq
DB search
MNMKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR
DSTQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTVARLVKNTYEEEE
IIADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYG
KKLLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIAKEKEES
NKLYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKKIKVEKGKNALSVKPYIDELSKI
ESDRDINKEELQTAMEQLKNIDLNLKNIEEEYKKVSKDKEEEIPLLMQKENNLLQAIEIK
KKVEVIKRERADLVQKYKEKESLIRNKNIVKKHIEENINKISEEIKLKEEEINLLKIDGD
RREKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYELKYKDILEIQRDINKKLEYV
SGKREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKEKQVVKLNLE
KQYKEILQTLKSREEKIMSLEGKIKYIEKMDMASILAVNLKEQEPCPVCGSMHHIKLAEK
VDIKELEILREDHRNAFKELENIKIEEKEKNILLISVEKEEELILEELENLKEQLKDRNL
EDLRGELQKEKNDFEKLNENIKDWEKEKLILEENINKLQKEKNDIDKEEAKNHEAISKEK
ELIASIKKDMEEREILFKEKEKEYLNLKEEIKISNVEEEISRIRAYDKKIEEYNKIIKNE
REVLESENNKREETIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVGEISIEHLH
QVKKSIGNIKEKEEILKSKLELEGKNREILWKNKISKEQIKINLEKLYNEKYIQLNKALE
ENKFHALEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLKGERIEKESWKD
IRLKKENKEKELEDIIKNIVIEEKLISDMENNIKALKDLLDEKEKVSHKKALLEDIDKLV
QGNKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTL
SGGETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDRL
SVGIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaaccgaagaaacttgtgattaaaggactaaacagttttatagaaaaacag
gaaatagactttgaaactttagtcaatagaggtttgtttggcatatttggccctacaggt
agtggaaaatccagtatattagatgctataactatggctttatatggagatatagcaagg
gatagtactcagtttataaatttagatacggattctttatttgtaagctatgagtttcag
atagcctcagtagatgaaagagatgattatattgtttctagaactgtaaaaagagataaa
aaaggtggttataagactaccgtagctaggttagttaaaaatacttacgaggaagaagaa
ataatagcagataagccgagagatatacaaaaaaatatagaatctataataggattaacc
gcagaagattttactcgttcagtagtgttgccacaaggtaaatttagtgagttcttgaag
ttaagtggaaaaagtagaagagatatgttagagagaatatttggattagagaagtatggc
aaaaaacttttagaaagaataagaaaagcaagaaataaggaaatatcctctttaacatta
atagaaggaagattagaacagtataaagatatatccaaggaaaaattacaggaactaaaa
atacagtatgaaaatttgttaaaagaaaaatctaaaatagcgaaagaaaaagaagaaagc
aataagctttatgaaaagtataaaaatatatgggaacttcaagaggaattaaatatttat
ttaaataaattagaaaatcttaaaaaagggttgctaaatattgaagagaaaaaaataaaa
gtagaaaagggaaagaatgcattaagtgttaaaccctatatagatgaacttagcaaaatt
gaatcagatagagatataaataaagaggaattacaaactgcaatggagcagttaaaaaat
atagatttaaatttaaaaaatatagaagaagaatacaagaaagtatcaaaggataaagaa
gaagaaatacctttattaatgcagaaagaaaataatttactacaggctatagaaataaag
aagaaggttgaagttataaaaagggaaagagcagatctagtacaaaaatataaggaaaag
gaaagcttaataagaaacaaaaatatagttaaaaaacatatagaggaaaatataaataag
atttctgaggaaataaaattaaaagaagaagaaataaatttattaaagatagatggagac
agaagagaaaagatacaaaaactatatgaaatagataaagaatataaaagattaaattta
gaagtttgcaatataacagaaagaataaatataaaaataaagagcttaaaagagtatgaa
ttaaagtataaagatatattagaaatacaaagggatataaataaaaaattagaatatgtt
tcaggcaaaagagaagatttaataaaaaactctcctgggaacaatgatattttgcttgat
aagaaagattatataaataaattaatggaaatttttaatgatttaaataaaataaatgat
agaaaacaggaattagaaaaaaatttaaaagaaaaacaagtagtaaaattaaatttagaa
aaacaatataaagaaatattacaaacattaaagtctagagaagaaaaaattatgagccta
gagggaaaaataaaatatatagaaaaaatggatatggcctctatattagctgttaattta
aaggaacaagaaccttgtcctgtatgtggatctatgcatcatattaaattagctgaaaaa
gtagatataaaggaattagaaattctaagagaagatcatagaaatgcatttaaagaatta
gaaaatataaaaatagaagaaaaagaaaaaaatatacttttaatttctgtggaaaaagaa
gaagaattaatattagaggaattagaaaatttaaaagagcaattaaaagatagaaactta
gaggatttaaggggagaactacaaaaagaaaaaaatgattttgaaaaattaaatgaaaat
ataaaagactgggaaaaagaaaaattaatattagaagaaaatataaacaagctacaaaaa
gaaaaaaacgatatagataaagaggaagctaaaaatcatgaagctatatcaaaggaaaaa
gaattaatagcttctataaaaaaggacatggaagaaagagaaatattatttaaggaaaaa
gaaaaagaatatttaaatttaaaagaagaaattaaaatttctaatgtggaagaagaaata
agtagaattagagcttatgataaaaaaatagaggaatataataagattataaaaaatgaa
agagaagttttagagagtgaaaataataaaagagaagaaacaattaaacagataaatatt
atggaaatagagttaggcaaaataatagaagcgggaaaagaaaagaaaaattttatagac
aaagaagaggaggaaataaaaaaattaaatgtaggagagatttctatagaacatttacac
caagtaaaaaaatccatagggaatataaaggaaaaagaagaaatcttaaaatctaagttg
gagttggaaggcaaaaacagagaaatattatggaaaaataaaataagtaaggaacaaata
aaaattaacttagaaaaactttataatgaaaaatatattcagttaaataaagccctagag
gaaaataaattccatgctttagaagatgcaaaattaatgctaatatgtaaagaagaaata
aaagaattagaaaaagagatagaagaatttgaaaaagagtataatagtttaaatataaat
atagaaagagtaaataaaaaattgaagggggaaaggatagagaaagaaagctggaaagat
ataaggcttaaaaaagaaaataaggaaaaagagctagaagatataattaaaaatattgta
atagaagaaaaacttataagtgatatggaaaataatataaaggcactaaaggacctatta
gatgaaaaagaaaaggtgtctcataaaaaagctttattagaagatatagataaattagtt
cagggaaataaatttgtagagtttgtagctatgaatcagttagaatatatagtttttgaa
gcttctaaaagacttaaggatataactagaggaaggtatgcattagagttagattgtaat
ggaaactttactatgagggatgattttaatggaggaggtataagacctacaaatactttg
tctggtggagaaacattcttaacatcattggcactagcattggcgctatcttcacagata
caactaaaaggaagctctcccttagaatttttctttttagatgagggctttggaacttta
gatagtgagcttttagatacagttatgacttctttagaaaatttaagaagtgatagatta
agtgtaggaataataagtcatgtagaggaacttaaaaatagagtaccaataaaacttata
gtagatcctgcggtaccaggagagggtggaagcaaaataaaaatagagtatagctaa
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