KEGG   Clostridium botulinum H04402 065: H04402_02475
Entry
H04402_02475      CDS       T02076                                 
Name
(GenBank) signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cbj  Clostridium botulinum H04402 065
Pathway
cbj02024  Quorum sensing
cbj03060  Protein export
cbj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cbj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    H04402_02475
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H04402_02475
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H04402_02475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbj02044]
    H04402_02475
Enzymes [BR:cbj01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     H04402_02475
Secretion system [BR:cbj02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   H04402_02475
  Eukaryotic Sec-SRP protein
   H04402_02475
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_30 AAA_17 nSTAND3 AAA_31 APS_kinase AAA_16 ATPase Zeta_toxin AAA_33 AAA_18 NPHP3_N ResIII ParA AAA_25 MeaB AAA_24 ATP_bind_1 6PF2K MMR_HSR1 AAA_14 ArsA_ATPase NACHT Arf YqeC AAA cobW hnRNP_Q_AcD AAA_5 TsaE Glycos_trans_3N
Other DBs
NCBI-ProteinID: CBZ04283
LinkDB
Position
complement(2594077..2595426)
AA seq 449 aa
MAFDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKC
MGNEVLQSLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGK
LALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAK
NNKNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKL
DISGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDV
LSLIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKE
LKNIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLK
DFQASKKMMKQMKGMEKGFKKGLFGKLPF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcctttgatggattagcttctaaacttcaggatgctttaaagaagcttagaggtaaa
ggtaagctttcagaaaaagatataaaagaagccatgagagaagtaaaacttgcattatta
gaagcagatgttaactataaagttgttaagaactttataaaaagtgttactgaaaaatgc
atgggtaacgaagtacttcaaagtttaacaccaggtcaacaggttataaagatagtaaac
gaagagttaacagagcttatgggaagtacagaaagtactttgaattcttccacttcagga
ctaacagttataatgctggtaggtcttcaaggggcaggaaaaactactatggcaggaaaa
cttgctcttcaccttagaaagagaaataaaagacctttacttgtagcctgtgacgtatat
agaccagcagctataaaacaacttcaagtagttggtaaacaaattgatattccagttttt
actatgggggataaattaaatcctgtggatatatctaaagctgctatagagcatgctaaa
aataacaagaataatgtagttataatagatacagcaggaagacttcatatagatgaagaa
cttatggatgagcttcataatataaaggaagaagtaaatccaagtgaaatactattagta
gtagatgctatgactgggcaagatgctgtaaatgtagctaataattttaatgataaacta
gatataagtggtgtaatacttacaaaattagatggggacacaagaggtggagctgccctt
tctattaaatctatgacaggtaagcctataaaatttgtaggtttaggggaaaagatgaat
gatttagaagtattttacccagatagaatggcttcaagaatacttggcatgggagatgta
ctttctttaattgaaaaagcacaacaatctatagatgaggagaaagctaaagaaattgga
gagaggatgttaaatcaagaatttaactttgaagatttcttagaatccatgcaacagatg
aagaaattaggtccgattaacaagttattagaaatgattccaggaatgaattctaaagaa
ttaaaaaacatagatctaagttctagtgaaaaagaaatgaaaaaaacagaagctataatt
agttcaatgactataaaagagagaagaaacccttcattaatatcttcctcaccttctaga
aaaagaaggatagcaaaggggtcagggacaaatgttcagcatgtaaataagcttcttaag
gattttcaagcttctaaaaaaatgatgaagcaaatgaaaggcatggaaaaaggatttaaa
aaaggtttatttggtaaattaccattttaa

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