Clostridium botulinum H04402 065: H04402_03434
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Entry
H04402_03434 CDS
T02076
Name
(GenBank) ATP-dependent DNA helicase rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbj
Clostridium botulinum H04402 065
Pathway
cbj03420
Nucleotide excision repair
cbj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H04402_03434
03430 Mismatch repair
H04402_03434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbj03400
]
H04402_03434
Enzymes [BR:
cbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H04402_03434
DNA repair and recombination proteins [BR:
cbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H04402_03434
MMR (mismatch excision repair)
Other MMR factors
H04402_03434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
SLFN-g3_helicase
AAA_11
AAA_30
Viral_helicase1
NB-ARC
CbiA
UvrD_C_2
ResIII
NACHT
zf-C2H2_aberr
Motif
Other DBs
NCBI-ProteinID:
CBZ05233
LinkDB
All DBs
Position
complement(3592775..3594904)
Genome browser
AA seq
709 aa
AA seq
DB search
MDNNQINNSMDKYIELSMEREYLDFIIDKVRKETGIYLDKRKDIVKDIVEYRKEFLEEDK
NDEDKVAEYFDHERYLKEKLYGFTDKKLKELTILEQNPYFGKVNFIDEGDEDSIYIGRYG
FLETGNYKPFIVDWRAPICQIFYQGKLGNIAYESPDGKIEVDVKSKRQYVIRKGILKGMF
DSALDVKDEVLQMILSENTKEKLKDIVMTIQEEQDNLIRQPKDKAMIVNGVAGSGKTTIA
LHRVAYLLYNYRNQIQDKVLILGPNNIFVDYISEVLPSLGENGVKQTTFKDFIEDLLPTN
NFLEYDNYIERFIKKDNEFIEDIAYKQSKAYMEDLDSFMEDLERNIFITEDVILMEEVAI
DKKEIDEMLHSYYKYMPLFKRTRKIKRIVFSKIRDVRNKKVYEIQRQYEEKLKKLSEEEL
QLNKNNLEFERKNNIRNIVRKSMELKKSLVWLDNPQVLDIYNEFNNNNKLTVDDIIAILY
LKIKLEGLRYRNEIKHIVIDEAQDYSFLQFVVLKEFTDCQSITIVGDVNQRTLPCKDEVP
MLCLDSVFNRVDVEYFNLDKSYRSTKEIIEYANKHLKANKIVPLVREGDPVKEVTVKNSR
EAIDKVNYYLSYLENKGYENIAIITTTLEQGKVIGSELKKQMYINLIEREDIIYSGGKII
IPSYLSKGLEFDATILILDDNNIGENLKYIMATRALHEMIVVHKEGKKL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggataataatcagataaataattccatggataaatatatagaactaagtatggaaaga
gaatatttagattttataatagataaagtaagaaaagaaacaggaatatatttagataaa
agaaaagatatagtaaaagatatagtagaatataggaaagaatttttagaagaagataaa
aatgatgaagataaagtagcagagtactttgatcatgaaagatacttaaaagaaaagctt
tatggttttacagataaaaaattaaaagagctcacaattttagaacagaatccttacttt
ggaaaagttaattttatagatgaaggggatgaagattctatctatataggtagatacgga
tttttagaaacaggtaattataaaccttttattgtagattggagagctcctatatgccaa
atattttatcaggggaaattaggaaatatagcatatgaatcaccagatggtaaaatagag
gtagatgtaaaatctaaaaggcaatatgttatccgtaagggtatattaaaaggtatgttt
gattctgctttagatgtaaaagatgaagttcttcaaatgattttaagtgaaaataccaaa
gaaaaattaaaggatatagttatgactatacaagaagagcaagataacttaattagacaa
cctaaagacaaagctatgattgttaatggagttgcaggtagtggtaagactaccatcgct
cttcatagagtagcatacttattatataattataggaaccaaatacaagataaagtacta
atactaggacctaataatattttcgtggattatatatcagaagtgttaccgagtctaggt
gaaaatggagttaaacaaactacctttaaggattttatagaagacttgctacctacaaat
aatttcttagaatatgataactatatagaaagatttataaaaaaagataatgaatttata
gaagatatagcatataaacaatctaaagcatatatggaagatttagatagctttatggaa
gatctagaacgaaacatatttattacagaagatgtaatattaatggaagaagttgctata
gataaaaaagaaatagacgaaatgcttcattcctattataaatatatgcctttatttaaa
agaactaggaagataaaaagaatagtattttctaaaataagagatgtgagaaacaaaaaa
gtttatgaaattcaaagacaatatgaagaaaaactaaaaaaattatcagaggaagaacta
caactaaataaaaataatttagagtttgaaagaaaaaataatataagaaacatagtgaga
aaatctatggagttaaagaaatcattagtatggttagataatccacaggttttggatata
tataatgagtttaataataacaataagcttactgtagatgatattatagctatattatat
ttaaaaataaaattagagggtttaagatataggaatgaaataaaacatatagtaatagac
gaagcacaggattattcatttttacagtttgtagtattaaaagaatttacagattgtcaa
tctataactatagtaggagatgttaatcaaagaacattaccttgcaaggatgaagttcct
atgttatgcttagattctgtctttaatagagtcgatgtagagtattttaatttagataaa
agttatagatcaacaaaagagattatagagtacgctaataaacatttaaaagcaaataaa
attgttcctttggtgagagaaggagaccctgtaaaagaagtaacagtgaagaattcaagg
gaagcaatagataaagttaattattatttaagttacttagaaaataaagggtatgaaaat
attgcaattataacaactacactagaacaggggaaagttataggatcagaattaaaaaaa
caaatgtatattaatttaatagaaagagaagatataatttattctggaggtaagataata
attccatcttatttatcaaaaggtttagaatttgatgctactattttaatattagatgat
aataatataggagaaaatttaaaatatataatggctacaagagctttacatgaaatgata
gttgtacacaaagaaggtaaaaagttataa
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