Clostridium botulinum B Eklund 17B (NRP): CLL_A0002
Help
Entry
CLL_A0002 CDS
T00696
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03030
DNA replication
cbk03430
Mismatch repair
cbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLL_A0002 (dnaN)
03430 Mismatch repair
CLL_A0002 (dnaN)
03440 Homologous recombination
CLL_A0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbk03032
]
CLL_A0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A0002 (dnaN)
Enzymes [BR:
cbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLL_A0002 (dnaN)
DNA replication proteins [BR:
cbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLL_A0002 (dnaN)
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLL_A0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Toast-rack_PspC-Cterm
DUF4738
DUF4923
Motif
Other DBs
NCBI-ProteinID:
ACD22381
UniProt:
B2THB5
LinkDB
All DBs
Position
1806..2906
Genome browser
AA seq
366 aa
AA seq
DB search
MIFICEKHKLLDGISIVQKAITGKSTMKVLDGIYINATNDGLRLIGSDMDLSIQTLVNAD
VLDKGEIVIDAKIFGEIIRKLPNSDIKIETVKEDVIQITCEKSVFNVVCMNAEEFPSLPN
INEDLKVEVNESILKNMIKGTSFSIAQDEARPILQGILFQVKDRNLNLVALDGYRLAIRS
EFLDNDINLEVVIPGKTLVEVSKILEDHDKNVDITFTNNHILFNLENTKIISRLLDGKFV
NYTSLLPQEHKLLVTVKKEEFQNGIERASLMAKDGNNNLINLDLKEETLIITSNSQLGKV
REEVSINLQGDEIEIAFNSRYLLDVLKNMESDEVILEMTSGVSPCVIKEKDGENSQYLVL
PVRQMR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatctttatatgtgaaaaacataaattattagatggtatttctatagttcaaaaagct
attacaggaaagtcaacaatgaaagtattagatggtatttacataaatgctactaatgat
ggattaagactaataggttcagacatggatcttagtattcaaacattggttaacgcagat
gttttagataaaggtgaaatagttattgatgctaagatatttggagagattattagaaag
cttccaaactctgatataaaaatagaaacggtaaaagaagatgtaatacaaatcacttgt
gaaaaatcagtttttaatgttgtatgcatgaatgctgaggaatttccatcattacctaac
attaatgaagatttaaaagtagaagttaatgaaagtattttaaaaaatatgattaaagga
acatctttttctattgcacaagatgaagcaagacctattttacaaggaatattatttcaa
gttaaagatagaaatttaaatttagttgcacttgatgggtatagattagctataagaagt
gaatttttagataatgacattaatttagaggtggttattccaggaaaaacattagttgag
gtatcaaaaatattagaagatcatgataaaaatgtagatataacatttactaataatcat
atattgtttaatttagaaaatactaaaattatatcaagattattagatgggaaatttgta
aattatacatcattactacctcaagaacataaattattagtcactgtgaaaaaagaagaa
ttccaaaatggtattgaaagagcttctttaatggccaaagatggaaataataatttaatc
aatttagaccttaaagaagagacgttaataataacatctaattctcaattgggaaaagtt
agggaagaagtatcaataaatctgcaaggtgacgaaatagaaattgcatttaattcaaga
tatttattagatgttcttaaaaatatggaaagtgatgaagtaattttagaaatgacatca
ggggtaagtccatgtgttataaaagaaaaagatggagaaaattcccaatatttagtttta
ccagtaagacaaatgagataa
DBGET
integrated database retrieval system
