Clostridium botulinum B Eklund 17B (NRP): CLL_A0267
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Entry
CLL_A0267 CDS
T00696
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLL_A0267 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbk03021
]
CLL_A0267 (rpoA)
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A0267 (rpoA)
Enzymes [BR:
cbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLL_A0267 (rpoA)
Transcription machinery [BR:
cbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLL_A0267 (rpoA)
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLL_A0267 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACD23340
UniProt:
B2TIK4
LinkDB
All DBs
Position
263908..264855
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPIIECIEASEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVATSSVKIDG
VLHEFSTVQGVKEDVTELILNIKSLALRMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKDLHIATLDDNGRLYMELTVNRGRGYVTQNKNKSDELPISSIAIDSIYTPVKKVNFTV
DNTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTNNTNDVEIMIEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLCLKLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcgaaaagccaataatagaatgtatcgaagctagtgaagacggaacttat
ggaaaatacgttgttgaaccacttgaaagaggatatggtattacattaggaaatgcccta
agaagaatattattatcatctcttccaggagtagcaactagttctgttaagatcgatgga
gttcttcatgagttttctactgttcaaggagttaaagaggatgttacagaattaattctt
aatattaaatctttagctttaagaatgaatggtgaaggtcctaaagttatctatattgat
gctaaaggaccaggagaagttactggagcagatataaaaactgacggagatgttgaagtt
gttaataaggatttacatatagcaactttagatgacaatggaagactttatatggaatta
acagttaatagaggaagaggatacgttactcaaaacaaaaataagagtgatgaattacca
atttcatcaatagctattgattcaatctatacaccagtaaaaaaagttaattttacagtt
gacaatacgagagtaggtcaaattactgattatgataaattaactttagaaatatggact
aatggtactataaagattgatgaagctataagtttatcagctaaaatccttatagaacat
tttaaattatttatgtcattaactaataatactaatgatgttgaaataatgatagaaaaa
gaagaagataaaaaagagaaagtactagaaatgactgtagaagaacttgatttatcagtt
agatcatataactgtttaaagagagctggaattaacacagtacaagaacttgctactaaa
tcaatggatgatatgatgaaagtcagaaatctaggaaagaaatctttagaagaagttgag
agaaaacttaaagagttaggtttatgcttaaaactaaacgatgagtaa
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