Clostridium botulinum B Eklund 17B (NRP): CLL_A0516
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Entry
CLL_A0516 CDS
T00696
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLL_A0516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A0516
Enzymes [BR:
cbk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLL_A0516
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLL_A0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
Helicase_RecD
PhoH
HHH
DNA_pol_lambd_f
AAA_22
nSTAND3
SLFN-g3_helicase
DEAD
HHH_2
NTPase_1
AAA
AAA_23
AAA_12
NPHP3_N
ABC_tran
AAA_28
UPF0758_N
UvrD_C
HHH_3
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ACD22772
UniProt:
B2TK11
LinkDB
All DBs
Position
508917..511136
Genome browser
AA seq
739 aa
AA seq
DB search
MEVIDGFVENIVFKSEETGYVVCKIRTAKNLISAVGTIPFIKEGQNVRIKGHWTVHKQFG
QQFEISEFEEILPDSLDGIEKYLSAGIIHGIGPVTAKKIIDKFGEKTLDILENHIEELME
IEGIGKKKFMIIYESYMEQNGLKEVILHFHKYGLSNNQCMKIYKKFGPSSNQIVSENPYI
LSEEIVGIGFKTADRIAMNLGISDNSEFRIKSGIKHTLNQFCLLGNTYMPKEKLIEDCEK
LLSIERILIEESVYSIAVSKNIILEKLGEEEAVYLLPYYYCELGVTNKIITLGMQTIQTI
NSDLDFEINVLEKEYNIKFAASQREAILGAFNNGIEIITGGPGTGKTTIIKCIIDIYEKN
GMDVILGAPTGRAAKRMTESTGREAKTIHRLLEIGVAEDDSVFGKSESSPLDTDVIIIDE
ASMIDIMLMHNLLKAVNLGTRLIIVGDVDQLPSVGAGNVLKDLIESQYIKVVRLNEIFRQ
GTESLITTNAHRINQGEAPILNQKDKDFFFIGEENLNKTVNVIIDLINRRLPSFNKQWNR
FRDMQVLSPMRKGILGVNNLNINLQKVFNPPSKEKKEKKIKEIIFREGDKIMQTKNNYSL
KWTRIKGEGEYEGVGVFNGDLGFIQSIDEENKSFTITFDDERKVIYDFMYLDELDLAYAT
TIHKSQGSEFKVVIIPVFMGSPFLMNRNLLYTGITRAKELVVVVGVKRALIYMVGNTNIM
ERYSGLKYRIKDILTNAIE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcatagatggctttgttgaaaacatcgtatttaaaagtgaggaaactggatat
gtagtttgtaaaataagaactgctaaaaacttaataagtgcagtggggactattccattt
ataaaagaggggcaaaatgtaagaataaagggacattggactgtgcataaacagtttgga
cagcagtttgaaatatctgaatttgaagagatattaccagattcattagatggaatagaa
aaatatttaagtgcaggaataatacatggaataggtccagttacagctaaaaagataatt
gataagtttggtgaaaaaactttagatatattagaaaatcatatagaagaattaatggaa
atagaaggcataggaaaaaagaaattcatgataatatatgaatcttatatggaacagaat
ggattaaaggaagttatattacattttcataaatatggattaagcaataatcaatgtatg
aaaatatataaaaaatttggaccatcatctaaccaaatagtttcagaaaatccttatata
ttatctgaagagatagttggaattggatttaaaacagcagatagaattgctatgaatctt
ggaataagtgataattcagagtttagaattaaaagtggtataaagcatactttaaatcaa
ttttgtttattaggtaatacatatatgccaaaagaaaaattaatagaagattgcgaaaaa
cttttatctattgaaagaatattaatagaggaaagtgtatactcaatagctgtttcaaaa
aatataatattagaaaaattgggagaagaagaagctgtatatttacttccttattattat
tgtgagctaggggttacaaataaaataattactttgggtatgcaaacaatacaaactatt
aattctgacttggattttgaaataaatgtattagaaaaggaatataatataaagtttgcg
gcatctcaaagggaagctatacttggagcttttaataatggaattgaaataataacaggt
ggtcctggtacaggaaagactactataataaaatgtataattgatatatatgaaaagaac
ggtatggatgtaatattaggtgcaccaactggaagagctgcaaaaaggatgacggaatca
acaggccgtgaagctaagactatacacagattattagaaataggtgtagctgaagatgac
tctgtttttggaaagagtgaatcatctccattagatactgatgttataattatagatgaa
gcttctatgatagatataatgcttatgcataatttgctaaaagctgttaatttaggtact
agattaataattgttggtgacgttgatcaattgccatcagtaggagctggaaatgtatta
aaagatttaatagaaagccagtatattaaagttgtaagacttaatgaaatatttagacaa
ggaactgaaagtttaataacaacgaatgctcatagaataaatcaaggtgaggcaccaata
ttaaatcaaaaagataaggattttttctttattggtgaagaaaatttaaataaaacagtt
aatgttataatagatttaataaataggagacttccaagctttaacaaacaatggaataga
tttagagatatgcaagtattaagtcctatgagaaaaggcatacttggagtaaataattta
aatataaatcttcaaaaggtatttaatccaccatcaaaagaaaagaaagagaagaagata
aaagaaattatttttagagaaggtgacaaaataatgcaaactaaaaataattattcttta
aaatggactagaattaagggtgagggagaatatgaaggtgttggagtatttaatggtgat
ttaggttttatacaaagcatagatgaagaaaataaaagttttactataacatttgatgac
gagagaaaagttatatatgattttatgtatttagatgaattagatttagcatatgctact
acaatacataaaagtcaagggagtgaattcaaagtagtaataattccagtattcatggga
agcccttttttaatgaataggaatcttttatatacgggtataactagagcaaaagagctt
gtggtagttgttggagtaaaaagagctttaatttacatggttggaaatacaaatatcatg
gagaggtattcaggacttaaatatagaattaaagacatactgactaatgcgatagaatag
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