Clostridium botulinum B Eklund 17B (NRP): CLL_A0784
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Entry
CLL_A0784 CDS
T00696
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03410
Base excision repair
cbk03430
Mismatch repair
cbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLL_A0784 (recJ)
03430 Mismatch repair
CLL_A0784 (recJ)
03440 Homologous recombination
CLL_A0784 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A0784 (recJ)
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CLL_A0784 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLL_A0784 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLL_A0784 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
TRAF3_RING
Motif
Other DBs
NCBI-ProteinID:
ACD24357
UniProt:
B2TLD6
LinkDB
All DBs
Position
800443..802209
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AA seq
588 aa
AA seq
DB search
MKERWFVKNIKADYKNISKKYGISELITRLMINRNIVEDNMIKNYIHPIYSNFHDPYEMK
DIEKATEILKEKIYSKEKIRIIGDYDVDGVISVYLLYTALKKCGANVDYEIPDRIKDGYG
INKKIILEAKNDEIDTLLTCDNGISAIEQIKYAKELGMTVIVTDHHDIPFAEDEKGDRTF
ISSEADSIINPKQIECGYKFDKICGAGVAFKLIEVLYEKMKISKEELYKLIEFVAIATVC
DVVDLIDENRIFVKNGLKMINNTTNLGLKYLMKETKMDGKEISTYHLGFVIGPCINASGR
LDSAKKGLRLLLSQNEEEALNLAKELVELNDERKSMTSHGVEKAIEIIEDSTMKDDKVFV
IYIPEVHESLAGIIAGRIREKYNVPTIILTKAEDGVKGSGRSIEEYNMFEELLTCKELLN
KFGGHPMAAGLSLDENNIDLLRKKLNRNTKLTDEELVPKVIIDVPLSLENINYDMINDLE
ILEPFGKGNSKPLFGAKNVNAVKAMVLGQNKNVLKIKLKTVIGRTIDSIYFGDIQEFEQY
ITKKYNYEELQKLYDGEFNSVNLDLIFYPSINEYNGNINIQIVIQNYR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagatggtttgtaaaaaatattaaagccgattataagaatatatctaaaaaa
tatggtattagtgaattaataactcgattaatgataaatagaaatattgtggaagataat
atgataaagaattatatacatcccatttatagtaattttcatgatccatatgaaatgaaa
gatatagagaaggctactgaaatattaaaagaaaaaatatattctaaagagaaaatcagg
ataattggtgattacgatgttgatggagtaattagtgtttatctattatatacagcgctt
aaaaaatgcggtgcaaatgttgattatgaaatacccgacaggataaaagatggatatggt
ataaataaaaaaataatacttgaagctaagaatgatgaaatagatactttattaacatgt
gataatgggatttctgcaatagaacagataaaatatgctaaagaattaggtatgactgta
atagtaacagatcatcatgatattccttttgctgaagatgaaaaaggagatagaactttt
atatcatcagaagcagattcaataattaatcctaaacaaattgagtgtggatacaaattt
gataaaatatgtggtgccggtgtggcatttaaactaattgaagttttatatgaaaaaatg
aaaatttcaaaggaagaactttataagctaatagagtttgttgcaatagcaactgtgtgt
gatgttgtggatttaattgatgaaaataggatatttgttaaaaatggattaaagatgata
aataatactacaaatttaggattaaaatatttaatgaaagaaactaagatggatggtaag
gaaatttcaacttatcatttgggttttgttataggaccatgtataaatgcatctggaaga
ttagattcagctaaaaaggggttaaggctattattatctcaaaatgaagaagaagcttta
aatttagcaaaagagttagttgaactaaatgatgaaagaaaaagtatgactagtcatggt
gtggaaaaagctatagaaattatagaagatagtactatgaaagatgataaggtatttgtt
atatatattcctgaagttcatgaaagcttagcaggaataatagcagggagaataagagaa
aaatataatgttcctacaataattcttacaaaagctgaagatggtgtcaaaggttcggga
agatcaatagaagaatataatatgtttgaagaattgttaacgtgtaaggaattattaaat
aagttcggaggacatccaatggcggctggtttgtctttagatgaaaataatatagattta
cttagaaaaaaacttaatagaaacacgaaattaacagatgaggagcttgtgcctaaagta
ataatagatgtacctttaagcttagaaaatattaattatgatatgataaatgatttagaa
attttagaaccttttggaaagggaaattcaaaacctttgtttggagcaaaaaatgttaat
gcagtaaaagctatggtacttggacaaaataaaaatgtattaaaaataaaattgaaaact
gttattggaagaacaatagattcaatttattttggagatattcaagaatttgaacaatat
ataactaagaaatataattatgaagaactgcaaaaattatatgatggggaatttaactcg
gtaaatttagatctaatcttttatccaagtataaatgaatacaatgggaatataaacatt
caaatagttatacaaaattatagataa
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