Clostridium botulinum B Eklund 17B (NRP): CLL_A1256
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Entry
CLL_A1256 CDS
T00696
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbk03032
]
CLL_A1256 (topA)
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A1256 (topA)
Enzymes [BR:
cbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLL_A1256 (topA)
DNA replication proteins [BR:
cbk03032
]
Prokaryotic type
DNA Topoisomerases
CLL_A1256 (topA)
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLL_A1256 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_RPB9
Toprim_2
HypA
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ACD23562
UniProt:
B2TJ38
LinkDB
All DBs
Position
1283845..1285932
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AA seq
695 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYIVEASMGHIRDLPKSKLGVDIENNYTPKYITIRGK
GELLDKLKKAAKKSDKVYLATDPDREGEAISWHLANILKIPENEKCRIVFNEITKSAVKG
AIKQARSIDLDLVDAQQARRILDRLVGYEISPILWKNVKWGLSAGRVQSAALKLICDREE
EIKAFIPKEYWSVDCVLKKDRKKFPIRLSTYKNKKIEINIEEEANKIKQELESGKFIIKS
IKKGNKVKNPLPPFTTSTLQQDASKKLNFMTKRTMSIAQALYEGVEIKGYGTVGLITYMR
TDSMRISEEAQENTKTFIESTYGKEYLPSAPRIYKGKKNIQDAHEAIRPTYVEITPEVAK
ENLTSEQYKLYSLIWNRFVASQMSSCVLNTNSIDILNGEYKLKASGSTINFDGFMKIYEY
LNEDDEKSVTLPVLEEGEELTAVSIDEKQHFTQPQPRYTEASFVKLLEEKGIGRPSTYVP
TISTLVGRSYVVREKKNLIPTELGFIVNNIVSEYFTQIVDADFTADMEKKLDNVEEGSES
WTQIVEEFFTPLKIAIEKAEKEISKVVIEDKVSDVKCDKCGRMMVIKRGRYGEFLACPGY
PECKNAKPIVEELDVPCPECGKTIVVKKSKRGKKFFGCSGYPECTFVSWYEPVKDKCPKC
DSYMVLKYSKTKGKYIKCSNGDCDYTKELKEDKTE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaacttgtaatcgttgagtcgccagcaaaagcaaagacaattggtaaatat
ttaggaaaaaattatattgtagaagcatctatgggtcatataagagatttacctaaaagt
aaattaggtgttgatatagagaataattatacaccaaagtatataacaattagaggcaag
ggtgaactgttagataagctaaagaaagcagctaaaaaatctgataaagtatatttggca
actgaccccgatcgtgagggagaagctatatcatggcatttagctaacattttaaaaata
cctgaaaatgaaaaatgcagaatagtttttaatgaaattactaaaagtgcagtaaaaggt
gctataaaacaagctagaagtatagatttagacttagttgatgcgcaacaagctagaaga
atattagatagacttgttgggtatgaaatcagtccaattttatggaaaaatgtaaaatgg
ggtcttagtgcaggtagagttcaatcagcagcattaaaattaatttgtgatagagaagaa
gaaattaaagcatttatacctaaagaatattggtctgttgattgcgtattaaaaaaagat
agaaagaaatttccaataagactttcaacttataaaaataaaaaaattgaaattaacata
gaagaagaagctaataaaataaagcaagaacttgaaagtggtaagtttattataaagtca
ataaaaaaaggtaataaggttaaaaatccattaccaccatttacaacaagtacacttcaa
caagatgctagtaaaaagttgaattttatgactaagagaactatgtcaattgctcaagct
ctttatgaaggtgtagaaattaagggatatggaactgttggtttaattacttatatgaga
acagattctatgagaatatctgaagaagctcaagaaaatacaaaaacatttatcgaaagt
acttatggtaaagaatatttaccaagtgctcctaggatatataaaggaaagaaaaatatt
caagatgctcatgaagctattagacctacatacgtagaaattacaccagaagtagcaaaa
gaaaatttaacttcggaacaatataaactatattcattaatttggaatagatttgtagca
agtcaaatgtcatcatgtgtacttaatacaaattctatagatatattaaatggagaatat
aaattaaaagcatcaggatcaacaataaattttgatgggtttatgaaaatatacgaatat
ttaaatgaagatgatgaaaagtctgttacattacctgttttagaagaaggggaagaatta
acagctgtatccatagatgaaaaacaacattttacacaacctcaaccaagatacacagaa
gcatcttttgttaaattactagaagagaaaggaataggaagacctagtacttatgtacca
acaatatcaacattagttggtaggtcatatgttgttcgtgaaaagaaaaacttaattcca
acggaattgggatttatagtgaataatatagttagtgaatatttcactcaaatagtagat
gcagattttacagctgatatggagaaaaagcttgataatgttgaagaaggaagtgaaagt
tggactcaaatagtagaagaattcttcacacctctaaagatagcaatagaaaaagccgaa
aaggaaatatcaaaggttgtaatagaagataaagttagtgatgttaagtgtgataaatgt
ggtcgcatgatggtaataaaaagaggccgatatggtgaatttttagcgtgtcctggatac
ccagaatgtaagaatgctaaaccaatagtagaagaactagatgtaccatgtcctgaatgt
ggaaaaactatagttgttaagaaaagtaaacgaggaaagaaattttttggatgttcagga
tatccagaatgtacttttgttagttggtatgaaccagtaaaagataaatgtcctaaatgt
gattcttatatggtgcttaaatattcaaaaactaaaggaaaatatattaagtgttctaac
ggagactgtgattatactaaagaacttaaagaagataaaactgaatag
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