Clostridium botulinum B Eklund 17B (NRP): CLL_A1590
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Entry
CLL_A1590 CDS
T00696
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLL_A1590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbk03019
]
CLL_A1590
Messenger RNA biogenesis [BR:
cbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLL_A1590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ACD23978
UniProt:
B2TKE9
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Position
1649776..1651494
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AA seq
572 aa
AA seq
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MENITEKNLKSYKPKKVSLKNKPKLKIIPLGGLGEIGKNITAFEYGDEIIVIDCGLAFPD
EDLYGIDIIIPDVTYLIRNKNRVKGFFITHGHEDHIGGIPYVLQQINVPVYATKLTLALI
ESKLEEHHMLNDCKLNLVEVGESVKLKNFNVEFIRNNHSIPEACSIAMHTPMGIIVHSGD
FKIDFTPIDGHVMNLQRYAELGKKGVLLLMADSTNALHKGYTMSEKTVGETLNGLFSKAT
GRVIVSTFASNVHRLQQISDCSIKNKRKIAFSGRSMEKISEIAMNLGYLSIPKEMIVSLD
EIKNCPNDQITIVTTGSQGESMAALSRIAASTHKYIEIQRGDMVIISASPIPGNEKAVSN
LINDLTEKGANVIYKTIEDIHVSGHACEQELRVIQSLLKPKFFIPVHGEYKHLITHAKIA
QSMGLDENNIFLLDTGDIFELSRNKGKVVGKVPSGRVLIDGLGIGDVGNMVLRDRKNLAE
DGIITVVVAIDRRNKVILSGPDIVSRGFVYVRNSEDLINNVRRIVTKVVEKCLDDNITQW
AEIKNSIRREVDSFVYTTMKRKPMILPVIVEI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatattacagaaaaaaatttaaagagttataaaccaaagaaggtttcattgaaa
aataagccgaaattaaaaataattccattaggtggacttggagaaataggaaagaatatt
acagcatttgaatatggtgatgaaataattgttatagattgtggtttagcgtttccagat
gaagatctttatggaattgacatcataattcctgatgttacatatttaataagaaataaa
aatagagtaaaaggcttttttataactcatggtcatgaagatcatataggaggtatacct
tatgtactgcaacaaattaatgttccagtatatgcaactaaattaacattggcattaatt
gaaagtaaattagaagaacatcatatgttaaatgattgcaaattaaatcttgttgaagtt
ggtgaaagtgtaaaactgaagaatttcaatgtggagtttattagaaataatcatagtatt
ccagaggcatgttcgatagctatgcacaccccaatgggaattattgttcatagtggagat
tttaagatcgattttacacctatagatggtcatgtgatgaatcttcaaagatatgcagaa
cttggaaaaaaaggcgtactgttattgatggcagatagtactaatgcattgcataaagga
tatacaatgtcagaaaaaacagttggagaaacattaaatggacttttcagtaaagcgaca
ggtagagttatagtatctacttttgcatcaaatgttcatagacttcaacaaatcagtgat
tgctctataaaaaacaaaagaaagatagcttttagtggtagaagtatggagaaaatatca
gaaatcgcaatgaatttaggttatttatctataccaaaagaaatgatagtatcattagat
gaaataaaaaattgtccaaatgaccaaattactattgtaacaacaggtagccaaggtgaa
tcaatggcagcgctttctagaatagcagcttctactcataaatatatagaaatacaaaga
ggagatatggttataatttcagcatctccaataccaggaaatgagaaagctgtatctaac
ttaataaatgatttgacagaaaagggtgctaatgtaatatataaaactatagaagacata
catgtttcgggccatgcatgtgaacaagaacttagagtaattcaaagtttattaaagcct
aaattctttattcctgtacatggagaatacaagcatttaattactcatgctaaaattgct
caaagtatggggcttgatgaaaataacatatttttattagatacaggtgatatatttgaa
ttatcaagaaataaaggtaaagttgttggtaaagtaccatctggaagagtacttatagat
ggtcttggaatcggtgatgtgggaaatatggtattacgagatagaaagaatttagcagaa
gatggtattataactgtagtagtagcaatagataggagaaataaagtaatattatcagga
cctgatatagtatcaaggggctttgtatatgtgagaaattcagaggatctaattaataat
gtaagacgaattgttactaaagtggtagaaaaatgtttagatgataatataacacaatgg
gcagaaattaaaaatagtataagaagagaagttgatagttttgtatacactacaatgaaa
agaaaacctatgatattaccagtgattgtagaaatataa
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