Clostridium botulinum B Eklund 17B (NRP): CLL_A2347
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Entry
CLL_A2347 CDS
T00696
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLL_A2347 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbk03019
]
CLL_A2347 (recQ)
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A2347 (recQ)
Enzymes [BR:
cbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLL_A2347 (recQ)
Messenger RNA biogenesis [BR:
cbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLL_A2347 (recQ)
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLL_A2347 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ACD24981
UniProt:
B2TRW2
LinkDB
All DBs
Position
complement(2435241..2437679)
Genome browser
AA seq
812 aa
AA seq
DB search
MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLT
IVISPLISLMKDQVDALKDMGINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLES
LNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGFIKLLKTRPIITAFTATASEE
VREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK
EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRF
VVHYNMPKNIEGYYQEIGRAGRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYK
KLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNEGELVDKTIDAQKVLSCIYRM
KNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN
GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYV
IFGDATLKEMTVKYPVNKEQMLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDE
KEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKMIISKNSLKEISGRYPINIDE
LKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM
LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKI
GYEKISAIKKQLPPYVKYEAIRAVILKKYFLI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaagaattagaacttttagaaaagtattatggatataagtcttttagaaaa
gggcaagaaaatataatttcaaacattatagatggaaatgatgtattagccataatgcca
actggtggtggtaaatcaatttgttatcaagttccagcacttatatttgaaggacttaca
atagttatttcacctcttatttctttaatgaaggatcaagtagatgcattaaaagatatg
ggcataaatggggaatttattaatagctcaataagtagtgctgaagaaaatagagttata
gataatattagaaatggacaatgcaaaatattatatgtggctccagaaagattagagtca
cttaactttttaaatgttatttcagaatgtagtgtatctcaaattgctatagatgaagca
cattgtatttctcaatggggacatgattttagaacaagctatacaaaggtgtctggtttt
attaagttacttaagacaagacctataattacagcatttacagcgacagcatcagaagaa
gtaagagaagatattataagacttctggacttaaataaacctaaaatttttattacagga
tttgatagagaaaatttacttataaatataataaaatctggagataaaaaatcatacctg
cacaattatataaataataataaggaatcttcaggagtaatttatgcagcaactagaaaa
gaagttgataagatacatgaagaattaagctataatggattctcaattactaaatatcat
gcaggattatctgaaaatgatagaaagcaaaatcaagaggattttatatatgacagaagt
aatattatggtggcaactaatgcctttggaatgggaatagataagcctaatataagattt
gtagtacattataatatgcctaaaaatatagaaggatattatcaggaaataggaagagca
ggaagggatggagaaaaaagtgaatgtatcttattattttcaccacaagatgttcaaata
caaaagtatttaatagaacaatctattgaaaatattgatagaaaaaataatcaatataaa
aaacttaatgaaatgactgattttgtatacagtaatgaatgttatagaaaatatatatta
gactattttggagaagtttatgatcataattgtaacaactgtagtaattgcttaaatgaa
ggagaattagtagataaaactatagatgctcaaaaagtcctttcatgtatatatagaatg
aaaaataaatttggttctggtatgttagttgatgttcttagaggatctaagaataaaaaa
gttatacaatttaactttaatgaattatcaacttatggaataatgaaagattattcaaat
gatgaacttaaaaattttattaatacattaatatcacatagatatatatcagttgttaat
ggaacatatcctgttttagggttaaatcaaagatcaatgagtgtattaaagtcagaagaa
aaagttgtattcaaagaatttaaaattgaaaagaaagctagagaagacaatgaattatat
gcaatacttaaagaaataagaaaagaaatttctacagaaaatggagtacctccatacgtt
atatttggagatgctacactaaaagaaatgacggtgaaatatccagttaataaggaacaa
atgttaaatatatcaggtgttggagaaataaaatataaaaaatatggggaaatatttgaa
aatgaaataaagaaatttgtaaaagaaaataatattgaaatatcaaatgaaatagatgaa
aaagaagaagtgaaaatggagagtattcatttagatattaatacaaatgaagaattattt
aataaattagatgaaattagacatgaatttgctaagaaggaaaatacaattcctaaaatg
ataatttctaaaaattcacttaaagagataagcggaagatatcctattaatatagatgaa
ttaaaagatataagtggaattggtccaaagaaaatttcattatatggagaaaagctgatt
tcagaagttaatgactatattacacaaaataatatagaaataaaatgggtaaataggaaa
aaaagaaaagtaattattgatggcgaagatagagaagataatgaaattgcaatagatatg
ttaaaggatggaaaaaaattaaatgagatatgtgatgaaatagaagtgtcaatctcaact
atcttgggatatgtgactgactatataaaggaatttggagaaagcaattttgatttaaat
ttagaagacttttataatgaagaagaagaaaatataattggtgatgtttgtgaaaaaatt
ggatatgaaaaaataagtgcaataaaaaaacaacttccaccatatgtaaaatatgaggct
atacgagcagttatattaaaaaaatattttttaatatag
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