Clostridium botulinum B Eklund 17B (NRP): CLL_A3068
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Entry
CLL_A3068 CDS
T00696
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk02020
Two-component system
cbk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLL_A3068 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLL_A3068 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbk03021
]
CLL_A3068 (rpoN)
Transcription machinery [BR:
cbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLL_A3068 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_23
HTH_IclR
Sigma70_r4
HTH_21
HTH_24
HTH_10
Xre-like-HTH
HTH_17
HTH_Crp_2
Sigma70_r4_2
LacI
Cro
HTH_AraC
HTH_Tnp_ISL3
MarR_2
HTH_20
Kringle
Motif
Other DBs
NCBI-ProteinID:
ACD23885
UniProt:
B2TPX7
LinkDB
All DBs
Position
complement(3172777..3174159)
Genome browser
AA seq
460 aa
AA seq
DB search
MKLDYGMKITQDQKLVLTQSMQQSIKLLQMSMHDLREFIDNEYAENPILEISELDKGIEN
NTSEDKYDYKNLIKELESNNYKNEVDNNYVNNKETDSTPWNYIEKSKSLNEFLQEQLIGL
NIDPYLVVVSKYIIESLDNRGYLEISTIQISNELNINQVKVEEALKIVQDLEPYGIGARN
IEECLMIQSKKLSILDDTMEKIIKNHLGNIADNKYKLVGEELGINPKEAQRYGDLIKTLE
PKPSRGFYTGEQVSYIIPDAEIKKIEKQYFIIMNDNVLPKLTINKTYKSVLENNADEKTV
CYVKEKINKAMFLIKSIEQRKSTLYNVLKCLLNKQSEFFDKGYEYIKPLTLKEVAEEIGM
HESTVSRAIKEKYVLTSYGTIKIKSLFESGFSLSNEGDIATNTIKNEIKRIVEEENKSKP
FSDQIISEILNKEKINISRRTVAKYREELGIKSSSKRKRI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagattatggtatgaaaattacccaggatcaaaaacttgtattaactcaaagt
atgcaacaatcgataaaacttttacaaatgtccatgcatgatttaagggagttcattgat
aatgaatatgctgaaaatccaatattagaaattagtgaattagataaaggaatagaaaat
aatacttcagaagataaatatgattacaaaaacctaataaaggaattagaatctaataat
tataagaatgaagttgataataattatgtaaataacaaagaaacagattctactccttgg
aattatattgaaaagagtaaatctttaaatgagtttttacaagaacaattaattggacta
aatattgatccatatttagtagtagtatcaaaatatatcatagaatccttagataataga
gggtatttggaaatatcaacaattcaaataagcaatgaacttaatataaatcaagttaaa
gtagaagaagcattgaaaattgtacaagacttagagccatacggtataggtgctagaaat
atagaagagtgtttaatgattcaaagtaaaaaattaagtatcttagatgatactatggaa
aaaataataaagaatcatttaggaaatatagcagataataaatataagctagtaggtgaa
gaattgggaataaaccctaaagaagctcaaaggtatggtgatttaattaaaacattagag
ccaaagccatctagaggattctacacaggagaacaagtaagttatataatccctgatgct
gaaataaaaaaaatagaaaagcaatattttattataatgaatgataacgtattacctaaa
cttactataaataaaacttataaaagtgttttggaaaataatgcagatgaaaaaacagta
tgttatgttaaagaaaaaattaataaagctatgtttttgataaagtctattgaacaaagg
aaaagcactttatataatgtgttgaaatgcttattaaataagcaaagtgaattttttgat
aaaggttacgagtacataaaacctttaacgttaaaagaagttgcagaagaaataggaatg
catgagtcaactgttagtagggctataaaagagaaatatgtacttactagttatggaaca
ataaagataaaatcattatttgaaagtggattttctttaagcaatgaaggggatatagct
accaatactataaaaaatgaaattaaaaggatagtagaagaagaaaataaatctaaacct
ttttcagatcaaattatttctgaaatattaaataaagaaaagataaatatttctagaaga
actgtggcaaaatatagagaagaattaggaattaaatcttcatcaaaaagaaagaggatt
taa
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