Clostridium botulinum B Eklund 17B (NRP): CLL_A3281
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Entry
CLL_A3281 CDS
T00696
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03420
Nucleotide excision repair
cbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLL_A3281
03430 Mismatch repair
CLL_A3281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbk03400
]
CLL_A3281
Enzymes [BR:
cbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLL_A3281
DNA repair and recombination proteins [BR:
cbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLL_A3281
MMR (mismatch excision repair)
Other MMR factors
CLL_A3281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
PhoH
Viral_helicase1
SLFN-g3_helicase
AAA_14
CbiA
AAA_30
nSTAND3
ResIII
DUF5740
zf-C2H2_aberr
NPHP3_N
NACHT
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ACD25086
UniProt:
B2TQL0
LinkDB
All DBs
Position
complement(3443518..3445629)
Genome browser
AA seq
703 aa
AA seq
DB search
MNQNLDFLMEQNKLEEVEKILSGEILNYLEKRKNITSQILQSRKKFIEEYKDDEDQVIDY
FDHENYVKEEAYKTIDKRLKEFTSLKEAPYFGKVTFMEQGNLPEELYIGRYGLTVEKTYE
SIIVDWRAPIASLFYKGILGKSSYTCPTGEIDTDILSRRQIIIKKGELKGIFDSEVDVKD
EILQMVLTENSSDKLKDIVMSIQSEQDEIIRSDKNKVVVVNGVAGSGKTTIALHRISYLL
YNYRKQFGDKVLIFGPNDIFMDYIAQVLPSLGEEGIKQMTFENFAIKQLGIDNLYIKSFS
KYIEEAMSGNRTALAEYQYKSSKKFLDLLNHEINKLSQNYFDIKPIIFNGEEIVGIKEIK
ELFDIHYKYMPLFRRSEKIKRVLISKIKDKRDAEVYKLNQEMKEKLASLSSYDLEIEKNN
LEYLKRMKIREIVRNVINSRKELDSWVSHEDIINIYKNITDTKQLGYMDLSGILYLMIKL
DGKRMKEEIKHIVIDEAQDYSVIQFEVIKGLTGCKSYTIVGDSNQRLINNNEEPAMLNLQ
PLFNEEKLHVQVQEYALNKSYRSTQEIMEYATKFLDDNRIIPLVRHGEKVIEEEVSSDDE
FVETILSIIEDYEEDGLENIAIIFNGNKDLAKFSHIIKEKISIQSFDREDILYKGGKVLI
PAYLAKGLEFDGVIVIENHEIDPLVKYIMCTRALHRLSLIKKQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaaatttagattttttaatggaacaaaataagctagaagaagttgaaaaaatt
ttaagtggtgaaatacttaattatctagaaaaaagaaaaaatataactagtcaaattctt
caatcaagaaaaaaatttattgaagaatataaagatgatgaagaccaagttatagattat
tttgatcatgaaaattacgtaaaagaagaagcttataagacgatagataaaagattaaaa
gaatttactagtttaaaagaagcaccttatttcggtaaagtaacatttatggaacagggg
aatttaccagaagaactttatataggtagatacggtttaactgtagaaaaaacttatgaa
tctataattgtggactggagggctcccattgcatcattattttataagggtatattagga
aaatctagttatacatgtccaactggtgagattgatacagatatactttctagaagacaa
ataataattaaaaaaggtgaacttaaaggtatatttgattcagaagtagatgttaaagat
gaaatacttcaaatggttcttactgaaaattcatcagataaacttaaagatatagtaatg
tcaatacaatctgaacaagatgaaataataagaagtgataagaataaagttgtagtagta
aatggagttgcaggttcaggaaaaacaactattgcattacatagaatatcttatcttctt
tataattatagaaaacaatttggagataaagttcttatatttggaccgaatgatatattt
atggattatattgctcaagtccttccttcgttaggtgaagaagggataaagcaaatgaca
tttgaaaactttgctataaaacaattaggcatagataatttatatataaaaagttttagt
aaatatatagaagaagctatgagtggaaatagaacagctcttgcagaataccaatataaa
agttctaaaaaattcttagatttattaaatcatgaaattaataaattaagtcaaaattac
tttgatattaaaccaataatttttaatggtgaagaaatagtaggaattaaagagattaaa
gaattatttgatatacattataaatacatgccgttatttagaagaagtgaaaaaataaaa
agagttcttatatctaaaataaaagataaaagagatgcagaagtatataaactaaatcaa
gaaatgaaagaaaaattagcttctttatcaagttatgatttagaaatagaaaagaataat
ttagaatatttaaagagaatgaaaattagggaaattgtaagaaatgtaattaactcaaga
aaagaattggattcttgggtaagtcatgaagatataataaatatttataaaaatataaca
gatactaagcaacttggatatatggacttaagtggaatattatatttaatgattaaatta
gatggaaaaagaatgaaagaagaaattaagcatatagtaatagatgaagcacaagattac
agtgttatacaatttgaagtaataaaagggcttacaggatgtaaaagttatacaatcgtt
ggagattctaatcaaagattaataaataataatgaagaaccagctatgttaaatttacaa
cctttatttaatgaggaaaagctgcatgtacaagtacaagagtatgcattaaataaaagt
tatagatctactcaagaaataatggaatatgcaactaagtttttggatgacaatagaata
attccattagttagacatggagaaaaagtaatagaagaagaggtatcttcagatgatgaa
tttgtagaaactattctttcgataattgaagattatgaagaagatggtcttgaaaatata
gctattatatttaatggaaataaggatcttgctaaattttctcatattattaaagaaaag
atcagtattcaaagttttgatagagaagatatactttataaaggtggaaaagttttaata
ccagcatatttagcaaaaggattagaatttgatggagttatagtaatagaaaaccatgaa
attgatccattggtaaaatatattatgtgtacaagagcgcttcatagactttcattaatc
aagaaacaataa
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