Clostridium botulinum A3 Loch Maree: CLK_1275
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Entry
CLK_1275 CDS
T00670
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLK_1275 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_1275 (xseA)
Enzymes [BR:
cbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CLK_1275 (xseA)
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLK_1275 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ACA54518
UniProt:
B1KT53
LinkDB
All DBs
Position
complement(2078405..2079610)
Genome browser
AA seq
401 aa
AA seq
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MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLKIHSSGHIYFSLKDGGSKINCVM
FKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKLK
EEGLFDDAHKKEIPKFSKKIGVITSPTGAAIKDIINVTKRRNKGIELLIYPALVQGTDAS
KTLIEGIKTLNKVEDVDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITGVGHETDF
TIIDFVSDRRAPTPSAAAEIAAFDREVLINEILNYKYNIKNSMENIIKEKRNYLNLYKQK
IEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNVLKKGYT
LIEDEGNNLITEKEALKELNKINIIFKDGRAKLSIKYIEEF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcatattaaaactcttacagtttctcagttaaatagatatgtaaaaaataccttagat
gctgattttatattaaataatgcttccgtaaagggtgaaatatcaaatcttaaaattcac
agtagcggccatatttatttttccttaaaggatggaggaagtaaaataaattgtgtaatg
tttaaaagctatgcatataatttaaagtttgcactagaaaatggtatggatgtagtagct
ctaggaaatgtatctgtatatgagaaggaaggctcttatcaattatatgttaaagatatg
aaaagagagggcataggagatctttatgtagcctttgaaaagttaaaagaaaagcttaaa
gaagaaggactttttgatgatgcacataaaaaagaaatacctaaattttctaaaaagata
ggggtaataacctcacctacaggagcagctataaaagatatcataaatgtaactaaaaga
agaaacaaaggaatagaactattaatatatcctgcattagtacagggaacagatgctagt
aaaactcttatagagggtataaaaacattaaataaagttgaagatgtagatataataata
ttagctcgtggaggaggatctatagaagaattatgggcttttaataatgaagaattagct
tatgcagtgtataattctaaaaagcctataataaccggagtaggtcatgaaacggatttt
actattatagactttgtaagtgatagaagagcacctactccctctgcggctgcggaaata
gctgcttttgatagagaagttttaataaacgagattttaaattataagtataatataaaa
aattctatggaaaatataataaaagaaaaaagaaattatttaaatttatacaaacagaaa
atagaagctaacagtcctactaatataatagcaaatgaatatagaaatatagataattta
aaagaattattaaatatgaaaatagaaggtaaattaaataaagaaaaaaacaacctatcc
agactatcctctttactagaagcgcataatccactaaatgtattaaagaaaggctatacg
ttaatagaggatgagggaaataatttaataacagaaaaagaagccttaaaggaattaaat
aaaataaacataatctttaaagatggtagggcaaaattatctattaaatatatagaagaa
ttttag
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