Clostridium botulinum A3 Loch Maree: CLK_1799
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Entry
CLK_1799 CDS
T00670
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl03030
DNA replication
cbl03430
Mismatch repair
cbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLK_1799 (polC)
03430 Mismatch repair
CLK_1799 (polC)
03440 Homologous recombination
CLK_1799 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbl03032
]
CLK_1799 (polC)
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_1799 (polC)
Enzymes [BR:
cbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLK_1799 (polC)
DNA replication proteins [BR:
cbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLK_1799 (polC)
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLK_1799 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACA57121
LinkDB
All DBs
Position
complement(2616121..2620419)
Genome browser
AA seq
1432 aa
AA seq
DB search
MENTSVGDLQKEINKEEFDTDKEIKIVRVQYFRKKNKLKIILKSIGNFTKEKEDHIKNIL
KKRFSMVEDFEIICYKDLSNITLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIRDIFGIKCNVKLEYDKSFNEEDYFKTIETMEKS
MIKNALSEIRSKEKKVIRKENSPKIREEGNKDTSIILGRSIKEDSIFMKDLNENSGIVVV
CGDVFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPKDADRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSAAKKGNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSNKNDKIIEIGAVKIEKGKIVDRFSEFVNPGRSIPDKITELTSITDDMVQDK
ETIDKILPRFIDFIGDSVVVAHNAAFDVSFINKNCKDLKIEFENSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKSFEMLKEKEIITLHNLNKEFLGNIN
IKKEPTYHLIILAKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVRNGSVKDEKELEEINKKICELG
EFYNKPVVATCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDEIKPIPDETFPPKIEGAEEDIRRMTTEKAHAIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCPKCKYSEFFTDGSVGSGADLKDKDCPKCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDEKNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTILRMLQDLTQVDPKSVPLGDPKVISLFTSPKALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELARISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKGLPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEISYEMYKRGIKFLKVDLYKSNATKFLIEGDSIRPPLSALQGVGKNAA
KSIEEARLEGEFISKEDLRLRTKVTKTVIETLENHGCLRGMQETNQISLFSL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacttcagttggtgatttgcaaaaggaaataaataaagaagagtttgataca
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaaaaata
atactaaaatccattggtaattttactaaagaaaaagaagaccatataaaaaatatatta
aagaagagattttctatggtggaggattttgaaataatctgctataaagatctatccaat
attaccctagaggaactttcaaaaaaatattgggtagatatagtgaatttagcttcttct
tctgtacctattgcaagggattgtcttttaaaatctaaaagagaagtgctagaagatagt
ataaatataacctataacaatgaatttttatgtaggtttctttcaaaaaataaattcgaa
ggtaaactgaaatcctatataagagatatatttggaataaaatgcaatgtaaaattagaa
tatgataaatcctttaatgaagaagattattttaaaactatagaaactatggaaaagtct
atgataaagaatgctttgagtgagatcaggtctaaagaaaagaaagtcattagaaaagaa
aattctccaaaaattagggaagaggggaataaggatacttctatcatattaggaagaagt
ataaaggaagatagtatatttatgaaggatttaaatgaaaattctggtatagtagtggtg
tgtggagatgtatttaaaaaagaagttatagaaacaaagactgggagaaaaatagtaact
tttttcataacagattacaccaattctatgacagttaaacttttcccaaggcctaaagat
gcagatagaataatagaggaaataaaagaggggatttattgcaaagttagaggagaagtg
gtaaatgacccttacgcaagagaatgtgtaataatggctaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcatagtcaa
atgagtgctatggatggaatgactccagtatcagaattagtgaaaagagctgctaaatgg
ggacataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tctgcggctaaaaaaggtaatataaaagttatatacggcatagaagcttatcttgtagat
gatggagtacctattgtatctaaagcaggggataaaaccatagaggatacttttgtagtt
tttgatttagaaactacaggtttttccaataaaaatgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagataggtttagtgaatttgtaaatccaggaagg
agcataccagacaaaataacagaacttacaagcataacagatgatatggtacaggataaa
gaaactatagataaaatacttccaagatttatagattttataggagactctgtggtggtt
gctcataatgcagcttttgatgtatcttttataaataaaaattgtaaagatttaaaaata
gaatttgaaaatagtgtaatggatacggtaacactaagcagatttttatttcctgagtta
aaaagatataaattaaatgttatagcaaagcatttaggtatatccttagaaaatcatcat
agagctgtggatgatgctaaagccacagcggatatcttattaaaatcttttgaaatgtta
aaagaaaaagaaataattaccttacataacttaaataaggaatttttaggaaatataaat
ataaaaaaagagcccacctatcatttaataattttggctaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaaatctaatttagagtatttctttaaaagaccaagaatg
gctaaaagtcttataaatgagtataaagaaggacttataataggttctgcctgtgaggcc
ggtcaaatatataaagaaatattaaagggaaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagagatacaacctctaggtaataatgaattccttgtaagaaac
ggttccgtaaaagatgaaaaagagcttgaagaaataaataaaaaaatatgtgaattaggt
gagttttataataaaccagtagtagcaacctgtgatgtgcattttttagatgaagagcat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcggataatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggagaggaa
aaggctaaagaagtagtaatttataatacaaataaaatagcagatatgatagatgaaata
aaaccaattccagatgaaacttttccacctaagatagagggagcggaagaggatataaga
agaatgactacagaaaaggctcatgctatatatggagatccacttccagaaatagtagaa
aaaagattaacaaaggaattaaattctataataaacaatggttacgctgtactttattta
atagctcataagttagtggctaaatcctatgaagatggatatttagtaggatctagagga
tctgttggatcttcctttgcagctactatgtcagatattacagaagttaatggattacca
cctcattatgtttgtcctaaatgtaaatatagtgaattctttacagatggatctgtaggt
tcaggggcagatttaaaggataaggattgtccaaagtgcggaactaaattaataaaagat
ggtcatgatataccttttgaaacttttttaggttttgaaggagataaagaaccggacata
gatttaaatttttcaggagaatatcaaggagtagttcataaatatacagaagttctattt
ggaaagggccatgtttttaaagcaggaactattggtactatagcagaaaaaactgcctat
ggttttgtgaaaaaatatttagatgaaaagaatataaaagctaacaatgcagaaatagaa
agattatccaaaggatgtacaggagttaaaaggacatcaggacagcatccaggaggaatt
atggttgtgcctgcagataatgaaatatttaactttactcctatacaacatccagcagat
gatacagaaagtgatgttataactacccactttgattatcattctataagtggtagactg
ttaaaattagatatactaggtcatgatgatcctacaatacttagaatgcttcaggatttg
actcaggtagaccctaaatctgtacctttaggagatccaaaggttataagtttatttaca
tcaccaaaggctttaggggttacagaggaggatatagattgtcctgtaggaacttatggt
cttccagagtttggaactaaatttgtaagacaaatgttattagatacaaaaccaaaaagt
tttgcagaattggccagaatatcaggattatcccatggtacagatgtatggcttaataac
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagat
gatataatggtatatctacttcaaaagggattaccaccaaagagcgcttttacaataatg
gaaaaagtaagaaagggtaaagggctcacggaagaacaggaagctttaatgaaagaacac
gatgtgccagattggtatatagagtcctgtaagaaaataaagtatatgtttcctaaaggt
catgctgtagcctatgtaatgatggccatgagaatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcggatgattttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgctatgggcaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatcttatgaaatgtataaa
agaggaataaagtttttaaaggtagatttatataaatctaatgctactaaatttttaata
gaaggagatagtataagaccacctttaagcgcccttcaaggtgtaggaaaaaatgcagct
aaaagtatagaagaagctagattagagggcgaatttatatcaaaagaagatttaagatta
agaactaaggttacaaaaactgttatagagactttagaaaatcatggttgcttaagagga
atgcaggaaactaaccaaatatccttatttagcctttag
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