Clostridium botulinum A3 Loch Maree: CLK_1826
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Entry
CLK_1826 CDS
T00670
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl02024
Quorum sensing
cbl03060
Protein export
cbl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CLK_1826 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CLK_1826 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLK_1826 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cbl02044
]
CLK_1826 (ffh)
Enzymes [BR:
cbl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CLK_1826 (ffh)
Secretion system [BR:
cbl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CLK_1826 (ffh)
Eukaryotic Sec-SRP protein
CLK_1826 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_30
AAA_17
nSTAND3
AAA_31
APS_kinase
AAA_16
Zeta_toxin
ATPase
AAA_33
ResIII
AAA_18
ParA
AAA_25
NPHP3_N
MeaB
AAA_24
6PF2K
NACHT
ArsA_ATPase
AAA_14
ATP_bind_1
hnRNP_Q_AcD
cobW
YqeC
Arf
AAA_5
TsaE
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
ACA53661
LinkDB
All DBs
Position
complement(2643242..2644591)
Genome browser
AA seq
449 aa
AA seq
DB search
MAFDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKC
MGNEVLGSLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGK
LALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAK
NNKNNVVIIDTAGRLHIDEELMDELHNIKGEVNPSEILLVVDAMTGQDAVNVANNFNDKL
DISGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDV
LSLIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMMPGMNSKE
LKNIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLK
DFQASKKMMKQMKGMEKGFKKGLFGKLPF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgatggattagcttctaaacttcaggatgctttaaagaagcttagaggtaaa
ggtaagctttcagaaaaagatataaaagaagccatgagagaagtaaaacttgcattatta
gaagcagatgttaactataaggttgttaagaactttataaaaagtgttactgaaaaatgc
atgggtaacgaagtacttggaagtttaacaccaggtcaacaggttataaagatagtaaat
gaagagttaacagagcttatgggaagtacagaaagtactttgaattcttccacttcagga
ctaacagttataatgcttgtaggtcttcaaggggcaggaaaaactactatggcaggaaaa
cttgctcttcaccttagaaagagaaataaaagacctttacttgtagcctgtgacgtatat
agaccagcagctataaaacaacttcaagtagttggtaaacaaattgatattccagttttt
actatgggggataaattaaatcctgtagatatatctaaagctgctatagagcatgctaaa
aataacaaaaataatgtggttataatagatacagcaggaaggcttcatatagatgaagaa
cttatggatgagcttcacaatataaagggggaagtaaatccaagtgaaatactattagta
gtagatgctatgactgggcaagatgctgtaaatgtagctaataattttaatgataaacta
gatataagtggtgtaatacttacaaaattagatggggacacaagaggtggagcggccctt
tctattaaatctatgacaggtaagcctataaaatttgtaggtttaggggaaaaaatgaat
gatttagaagtattttacccagatagaatggcttcaagaatacttggtatgggagatgta
ctttctttaattgaaaaagcacagcaatctatagatgaggaaaaagctaaggaaattgga
gaaagaatgttaaatcaagaatttaactttgaagatttcttagaatccatgcaacagatg
aaaaagttaggccccattaataagttattagaaatgatgccaggaatgaattccaaagaa
ttaaaaaatatagatttaagttctagtgaaaaagaaatgaaaaaaacagaagctataatt
agttcaatgactataaaagagagaagaaacccttcattaatatcttcctcaccttctaga
aaaagaaggatagcaaaggggtcagggacaaatgttcagaatgtaaataagcttcttaag
gattttcaagcttctaaaaaaatgatgaagcaaatgaaaggtatggaaaaaggatttaaa
aaaggtttatttggtaaattaccattttaa
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