Clostridium botulinum A3 Loch Maree: CLK_1893
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Entry
CLK_1893 CDS
T00670
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLK_1893 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_1893 (priA)
Enzymes [BR:
cbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLK_1893 (priA)
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLK_1893 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
SLFN-g3_helicase
T2SSE
nSTAND3
AAA_19
Viral_helicase1
Zn_ribbon_6
AAA_11
DUF87
AAA_7
TrwB_AAD_bind
Pox_A3L
AAA_22
NPHP3_N
Flavi_DEAD
DUF1258
Motif
Other DBs
NCBI-ProteinID:
ACA53982
LinkDB
All DBs
Position
complement(2708734..2710941)
Genome browser
AA seq
735 aa
AA seq
DB search
MFKYAGIIVNNSSIKLDKLFTYAIPEELNKKIRIGHRVKVPFGKGNKKIDGFVLKLYENY
EDENKVSIKSISNICEEDPLLDLNRVNLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKK
ENFIFIYKDLEGKYLKENYEQIYNSVKLNDGVYNKNVLNKKFGFSLSSINTLIKHGFLIQ
KNQVVNRYNEKIYGNYEEKILNGDQSLALYRILNSNRKLFLIHGVTGSGKTEIYMHLVKK
LIEKDKDSIILVPEISLTPQMVERFKGRFGKSIAIFHSKLSNGERFDEWMRVKRGEVKVA
IGARSAVFLPFKNLGAIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKVILGSATPS
LETYYRSKNKIIDLITIKERIEGASMPEVKIVDMREELMSGNKSIFSRELFEDISTRLEK
KEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGASTRIPKQCP
KCSSKYVKYFGAGTEKVEKAIKKCFPKVKTLRMDLDTTRTKDAYENIYNTFKKGEADILI
GTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKKEGKVLIQ
SYNPENYSIASAAKSDYEGFYNKEVKIRKDMNYPPFSKILLINLSSKYENKLIKNTHKIG
IILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGGIMKEIQKIVYTSLEQVY
NDIRVSIDINPNSLL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagtatgcaggtattatagtaaataattcttctataaaattagataaattattt
acttatgctattccagaggaattaaataaaaaaataagaataggacatagagtaaaagtt
ccctttggtaaaggtaataaaaaaatagatggctttgttttaaaactatatgaaaactat
gaagatgaaaataaagtttctataaaatctataagcaatatatgtgaagaggacccttta
ttagatttaaatagagtaaatcttgtagaacaaatgaaggaaaggtatctttgtacatat
ttagaagctataaaagtattagtgccaccaggtattacaaagggaaacaaagaaaaaaaa
gaaaattttatatttatatataaagatttagagggaaaatatttaaaagaaaattatgag
caaatatataactctgtaaaattaaatgatggagtttataataaaaatgtattaaataaa
aaatttggattttccttatcttccataaatacattaataaaacatggatttttaattcaa
aagaaccaagtagtaaatagatataatgaaaaaatatatgggaattatgaagaaaaaata
ctaaatggagaccaaagtttagctctttatagaattttaaattccaatagaaaattattt
ttaatacatggtgttacaggtagtggaaaaacagagatatatatgcatttagtaaaaaaa
ttaatagagaaagataaggattctataattttagtaccagaaatatcactaactcctcag
atggtggaaagatttaaaggtagatttgggaaaagtatagctatatttcatagcaaactc
tctaatggtgaaagatttgatgaatggatgagagtaaaaagaggagaagttaaagtagct
ataggggcaagatcggcagtgtttttacctttcaaaaatttaggtgctataataatagac
gaagaacatgaaagtagctataaatctgatagtaatcccaaatataatgctagagatata
gcagaacttagatgcatgaatgaaggctgtaaggtcattttaggatcagctacgccatct
ttggaaacttattatagaagtaaaaataaaataatagatttaatcacaataaaagaaaga
atagaaggggcatctatgccagaggttaaaatagttgatatgagagaagaacttatgtcg
ggtaataaatctatattcagcagggaactatttgaagatataagtacaaggttagaaaaa
aaagagcaaataatattatttttaaatagaagaggtttctctacctttgtatcctgtaga
gaatgtgggtatgtttttaaatgtaaaaattgtgatatttctttaacctatcataataaa
gataatagcttaagatgccattattgtggagcaagcaccagaataccaaaacaatgtcct
aaatgcagcagtaaatatgtaaagtattttggagcaggtacagaaaaagtggaaaaagct
ataaaaaaatgtttccctaaagttaaaactttaagaatggatttggataccacaagaact
aaggatgcttatgaaaatatttacaatacatttaaaaagggtgaagctgatatattaatt
ggaactcaaatgatagcaaaaggattagattttgaaaatgtaactttagttggagtttta
gcagcggatatgtctttaaatttaccagactatagatcaggagaaagaacttttcagctt
ataactcaagtttcaggaagggcaggaagaggaaagaaagaaggaaaagttttaattcaa
agttataatccagaaaattatagtatagcctccgcggctaaaagtgattatgaaggattt
tataataaagaggtaaaaataagaaaagatatgaattatcctcccttttcaaaaatattg
cttataaatttaagcagtaaatatgagaataaattaataaaaaatacacataaaattggt
ataatattaaagaatgttttatctaaatatgataacttaaatatgttaggtccttgtcct
agtccactatctaaaataaaagagatgtatagatggcaaataatattaaaaggaaatgtg
acgggaggtataatgaaagaaatacaaaaaatagtttatacttctttagaacaagtttat
aatgatataagagtaagtatagatataaatcctaacagtttgttataa
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