Clostridium botulinum A3 Loch Maree: CLK_1980
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Entry
CLK_1980 CDS
T00670
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl00260
Glycine, serine and threonine metabolism
cbl00460
Cyanoamino acid metabolism
cbl00630
Glyoxylate and dicarboxylate metabolism
cbl00670
One carbon pool by folate
cbl00680
Methane metabolism
cbl01100
Metabolic pathways
cbl01110
Biosynthesis of secondary metabolites
cbl01120
Microbial metabolism in diverse environments
cbl01200
Carbon metabolism
cbl01230
Biosynthesis of amino acids
cbl01240
Biosynthesis of cofactors
cbl04981
Folate transport and metabolism
Module
cbl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLK_1980 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CLK_1980 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLK_1980 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CLK_1980 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLK_1980 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CLK_1980 (glyA)
Enzymes [BR:
cbl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CLK_1980 (glyA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACA55327
UniProt:
B1KXQ5
LinkDB
All DBs
Position
complement(2802400..2803641)
Genome browser
AA seq
413 aa
AA seq
DB search
MDFTNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHK
RYYGGCEFVDEVEDLARERLKKLFAAEHANVQPHSGSQANMAVYMSVLQTGDTILGMDLS
HGGHLTHGSPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPRII
DFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILC
KEKYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKN
YGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRI
GTPAVTTRGFKEEEMKKIAYFMNYSIEHREENLSQIKEQIKEICKKYPLHQNA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggactttacaaatttgaaaaacacagatccagagctattagacatgataaagaaagaa
gaggaaagacaggaatataatatcgaattaatagcctcagaaaattttactagtttatct
gtaatggaggctatgggatctttattgacaaataaatatgcagaaggatacccacataaa
agatattatggaggatgtgaatttgtagatgaggtagaggatttagcaagagaaagatta
aaaaaattatttgctgcagaacatgctaatgtacaaccacattctggttcacaagccaat
atggcagtttatatgtctgtgcttcagactggtgatactatattaggtatggatttatcc
catggcggacatttaactcatggaagtccagtaaatttttcaggaaaattatataatttt
atatcctatggcgtagataaagaaacagaaactatagattatgagcaattaaagaaaata
gctttagaaaatagacctaaaatgatagtatctggagctagtgcttatcctagaattata
gattttcaaaagataagagaaatttgtgatgaaatagatgcttatatgatggtagatatg
gctcatatagcaggattagtagctacaggattacatccatcgccagtaccttatgcagat
tttgttacaacaactactcataaaactttaagaggacctagaggtggcgctattttatgt
aaagaaaaatatgcaaaagcagtagataaagctatattcccaggcattcaagggggacca
ttaatgcatactatagcagcaaaagccgtttgttttggggaagctttaagagaagattat
aaagaatatatgcagcaagttgttaaaaatactaaagttttaggagaagaattaaaaaat
tatggatttaggctaatatctggtggtacagataaccatttattactaatagatttaact
aataaaaatataacaggaaaagatgcagaaaaacttttagattcagtaggaattactgtg
aataaaaatacaataccttttgaaactttaagcccttttataactagtggaattaggata
ggaactccagcagtaactacaagaggatttaaggaagaggaaatgaaaaaaatagcctat
ttcatgaattattctatagaacatagagaagagaatttatctcaaataaaagagcaaata
aaagaaatttgtaaaaaatacccattgcatcaaaatgcataa
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