Entry |
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Name |
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
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KO |
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Organism |
cbl Clostridium botulinum A3 Loch Maree
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cbl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLK_2189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cbl03019]
CLK_2189
03009 Ribosome biogenesis [BR:cbl03009]
CLK_2189
Enzymes [BR:cbl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLK_2189
Messenger RNA biogenesis [BR:cbl03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLK_2189
Ribosome biogenesis [BR:cbl03009]
Prokaryotic type
rRNA helicases
CLK_2189
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3028005..3029579)
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AA seq |
524 aa
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
PVISSLCDNEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTPEEK
QTMLFSATMPAAIKKLALNYMKEDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
ERITKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS
AALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVRNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK |
NT seq |
1575 nt +upstreamnt +downstreamnt
atggaaaataaaaactttgaaaatttgaacttaaatgaagatgtactaaaagctatacaa
catatgggatttgaaactccatctgcaatacaagaaaaatcaattccagtagtattagaa
ggagcagatgttatagcccaagctcaaacaggaacaggtaaaactttagcttttggagct
cccgtaataagctctttgtgtgacaatgaaaagaaaaaaggcgtaaaagctttagtatta
acacctacaagagaactagcccttcaaataaaagatgagctaaagagattatctaaatat
agtaaaacaaaagtacttcctgtttatggaggagagtctatagaaagacaaataaaagat
attaaaagtggagtagatatagtagttggaactccaggaagaatattagaccacattaat
agaagaactttaaagcttggaggcattgatttcctaattttagacgaagcagatgaaatg
cttaatatgggatttatagaagatatagaaactataatggaaagtactcctgaagaaaaa
caaactatgcttttttcagctactatgccagcagctattaaaaaattagctttaaactac
atgaaagaagatgtagagcatatagctattttaaaaaaatctttaacagtagataaaata
gcacaacattattttgcagtaaaaaataaagataaactagaagctatatgtagaataata
gattcagaagaaccagaaagtgctataatattttgtagaacaaaaagaggcgttgatgaa
ttagttgaagctatgcaatcaaagggatacaatgtagaaggtatgcatggagacatgagc
caaaatcaaagaataaatactttgaaaaaatttaaaaaagctactttaaactttttagtt
gcaacagatgtagcggctagaggtatagacgtagaaaatatatctcatgttataaattat
gatatacctcaagatgcggaatcctatgttcacagaataggaagaacaggaagagctgat
aaagaaggaacagcctattctttagttacccctagagaagtatcttctattagacaaata
gaaagaataactaagagtaaaatcactaaaaaagaattacctactttagaggatatatta
gaaaagaaatatgataatttattaaatgatataacttctaaaatagaagaaaataaatat
gaaaagtttatgccaatggtaaaaactttagaacaaaattttgatttatctcaagtttca
gcagctttgatggaaatgttatttagtaaagaaatgagctttgattatacaaataacaaa
ctagaggcagaagttccagtaagattatttttaagcgtaggaagaaaagatagtataaat
gtaaaaagtctattaacatttattcaagatgaagcttctgtaagaaatcatgaaattgga
gatatagatatattagataaatttacttttatggatgtatcatcaggcactgcagaaaag
ataataaataaatgctcaggtaaaaaattaaatagaagaaaagttaatatcgaaatagct
aaaagtaaaaaataa |