Clostridium botulinum A3 Loch Maree: CLK_2688
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Entry
CLK_2688 CDS
T00670
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl03420
Nucleotide excision repair
cbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLK_2688 (pcrA)
03430 Mismatch repair
CLK_2688 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_2688 (pcrA)
Enzymes [BR:
cbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLK_2688 (pcrA)
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLK_2688 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CLK_2688 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACA54195
UniProt:
B1L1H4
LinkDB
All DBs
Position
complement(3553986..3556202)
Genome browser
AA seq
738 aa
AA seq
DB search
MDLKNKLNKEQYEAAITIDGPLLILAGAGSGKTRVLTYRIAHMIENLNIYPSKILAITFT
NKAAGEMKERIKALVGDVVEGMWVSTFHSSCVRILRREIDKLGYDKNFTIYDTYDQKTLV
KQCMEELNINDKEITDREIINTIGNQKDNLISPKEFKKISNGNYRKDRIADAYILYQKKL
KTNNALDFDDLIYKTVELFKTNKDVLEFYQRKFKYIMVDEYQDTNKSQYELVKLLALVHR
NMCVVGDDDQCIYEWRGADISNILNFEKDYKEAKVIKLEQNYRSKGNILNAANEVIKNNS
QRKNKVLRTENENGNKIKVFRAYSDIDEAKFVASEIKKIIKDNEKSFNDFAVLYRTNAQS
RIFEDVFMKRDIPYRLIGGLKFYDRKEIKDLMAYLKLINNPLDDISLRRIINVPKRSIGD
ATVKKVQEFANEMDECMYSVLLDADQILTLSQRSITSIKKFVSIMNSFIRKKDEISVSAL
IKEILEETGYLKELKNSKNPDDVSRVENLKELVSAAADFERESEDKSLGAFLEKVALVTD
IDNYDENSDSVAMMTVHSAKGLEFPVVFMVGMENGIFPGTQSLSDPKEMEESRRLCYVAI
TRAKEQLYITSAEIRKVFGRTVAYALSDFVSEISKDLKDNVNITGDVATDKVLHKNFGIR
SQKTNSINSYRSPSLNNVPKNNVDSNKLNVGLKVKHKDFGIGTIVSMSKVSDDIKLTIAF
DRRGVKILMLSMAPIEAV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaataaattaaataaagaacaatatgaagctgctattactatagatgga
cctttactgatactcgcaggagcaggttcaggcaagacaagggttttgacttatagaata
gcccatatgatagaaaatttgaatatatatccttctaaaattttggctataacttttaca
aataaggctgctggagaaatgaaagaaagaataaaggctttagtaggggatgtggtagaa
ggaatgtgggtttctacatttcactctagctgtgtaaggattttaagaagagaaatagat
aagttaggttatgataaaaattttactatatatgatacttatgatcaaaaaactttagtt
aagcaatgcatggaagaattgaatataaatgataaagaaattacagatagagaaataata
aataccataggcaatcaaaaggataatttaatatcacctaaggaatttaaaaaaatttct
aatggaaattatagaaaagatagaattgcagatgcatatattttataccaaaaaaaatta
aagactaataatgcattagattttgatgatttgatatataaaactgtggagttatttaaa
acaaataaagatgtattagaattttaccaaagaaaatttaaatatataatggtggatgaa
tatcaagatactaataaatctcaatatgaattagttaaattattagctttagttcataga
aatatgtgtgtagttggtgatgatgatcaatgtatatatgaatggagaggggcagatata
agcaatatattaaattttgagaaggattataaagaagctaaggttataaaattagagcaa
aattataggtcaaagggtaatatattaaatgctgccaatgaggttataaaaaataattct
caaagaaaaaataaagttttaagaactgaaaatgaaaatggaaacaagataaaagtattt
agagcatattctgatatagatgaagcaaaatttgtagcttccgaaatcaaaaaaataata
aaggataatgaaaaatcttttaatgattttgcagttttatatagaactaacgcccaatcc
cgtatttttgaagatgtgtttatgaaaagagatattccttatagattaataggtggatta
aagttttatgatagaaaagaaataaaggacttgatggcttatttaaagcttataaacaat
ccattagatgatataagtttaaggagaataataaatgttccaaaaaggagtataggtgat
gctacagtaaaaaaagttcaagaatttgcaaatgaaatggatgaatgtatgtatagcgtg
cttttagatgcggatcaaatattaacattgtctcaaagaagtataacatctatcaaaaag
ttcgtaagtataatgaatagttttataagaaaaaaagatgagataagtgtatctgctctt
ataaaagaaatattagaagaaacaggatatttaaaagaattaaaaaattctaagaatcca
gatgatgtaagtagagtagaaaatctgaaagaattagtttccgcagcagcggattttgaa
agagaatcagaagataaatctttaggagcgtttttagaaaaagtagcattagttacagat
atagataattatgatgaaaattcggatagtgttgctatgatgacagtacatagtgctaag
ggattagaatttcctgtagtatttatggtaggtatggaaaatggaatatttccaggaacg
caatcattgtcagatccaaaagaaatggaagagtctagaagactgtgttatgttgctata
acaagagcaaaagaacagttatatataacttcagcagaaattagaaaagtatttgggaga
accgtagcttatgctctatcagattttgtaagtgagatatccaaagatttaaaagacaat
gtaaatattactggagatgtagcaactgataaagtattgcataaaaattttggcataaga
tcacaaaaaacaaatagcattaattcttatagatcacctagtttaaataatgtacctaaa
aataatgtggattctaataagcttaatgtaggtttaaaggttaagcataaagattttgga
ataggaactatagttagtatgagtaaggtttccgatgacataaagctaactattgctttt
gaccgtagaggtgttaaaatattaatgcttagtatggcgccaattgaagcggtttag
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