Clostridium botulinum A3 Loch Maree: CLK_2890
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Entry
CLK_2890 CDS
T00670
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbl03016
]
CLK_2890 (truA)
Enzymes [BR:
cbl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CLK_2890 (truA)
Transfer RNA biogenesis [BR:
cbl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLK_2890 (truA)
Prokaryotic type
CLK_2890 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1473
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ACA56933
LinkDB
All DBs
Position
complement(3789260..3790000)
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AA seq
246 aa
AA seq
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MKNIKLKLEYDGTNYCGWQKQKNEKFITLQGTLEKVISNITKEKVEIIGVSRTDSGVHAK
GYVCNFFTNTRIPPENLQKVINNNLPQDIVVLSSEEVSNEFHSRFCSKGKTYEYTVLNSP
QPIAIGRNYIFQFKDKLNIDNMKIASRYFIGTHDFSAFKTKGSSVKTSVRTINEFEIDKK
GDFIKFTITGDGFLYNMVRIIVGILIEIGLNKREPEYVEYVIKSKDRRKAGKCVPSSGLC
LKEVFY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatataaagttaaaacttgaatatgatggaacaaattattgtgggtggcaaaaa
caaaaaaatgaaaaatttattacactacaaggtacgttagagaaagttataagtaatata
actaaagaaaaagtagaaattataggagtaagtagaacagattcaggggttcatgctaaa
ggatatgtatgtaatttctttactaacactagaataccacctgaaaatttacaaaaggta
attaataataatttaccacaagatatagtagttttaagttcagaggaagttagtaatgag
tttcactctagattttgtagtaagggcaaaacttatgaatatacagttctaaatagccct
cagcctatagccataggcagaaattatatttttcagtttaaagataaactcaatatagat
aatatgaagattgcatcaagatattttataggaacccatgatttttctgcttttaaaaca
aagggaagcagtgtgaaaacttcagtaagaactataaatgagtttgaaatagataaaaag
ggtgattttataaagtttacaattacaggagatggttttctttataacatggtaagaata
atagtaggtatattgatagaaattggattaaataaaagagaaccagaatatgtagagtat
gttataaaatcaaaagacagaaggaaagcaggtaaatgtgtaccttcatctgggctatgt
ttaaaggaagtattttattaa
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