| Entry |
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| Name |
(GenBank) helicase, RecD/TraA family
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| KO |
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| Organism |
cbl Clostridium botulinum A3 Loch Maree
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cbl00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLK_3347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cbl03400]
CLK_3347
Enzymes [BR:cbl01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLK_3347
DNA repair and recombination proteins [BR:cbl03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLK_3347
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
195358..197592
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| AA seq |
744 aa
MQEIQGFIEDILFKNDENGYVVAKIRKKKELITIVGCMPYITEGQNLKLKGEWVIHPQFG
NQFKVEICEEIVPDTVAGIERYLSSGIISGIGPVTAKKIVKKFGEETLNILDNNIERLTD
IEGIGKKKIEIIYDSYIKQNEVRNIMMFFQNYGVTPNQCMKVYKRFGENSISIVKENPYV
LTEEIRGIGFKTADKIARSLGIASNSPFRIQSGINYIINGFCSLGNTYMPLEKLISEAMD
ILGVREEEIHENIYNNIAENKLKIEKVKEQSCVFTLPYYYCELGVTKKILSLSLSQYDNL
NINIEDEVLNFEKNNNIKFHDSQREAIKGALENGVEIITGGPGTGKTTIINCITEIFEKA
NMKVYMAAPTGRAAKRMSETTGREAKTIHRMLEMGVSDDDTEEVFSKGEETPLECDVVII
DEASMIDIILMNTLLKAIALGTRIIIVGDVDQLPSVGPGNVLRDLIESKCVKVVRLKEIF
RQSKESMIIVNAHRINDGEMPIINKKDKDFYFIECSEPKKIVNTLLELSNRRLPKFNKSW
HKIHDIQILSPMRKGVLGVSSLNKELQSVLNPKNDSKKEMEFKDYIFRVGDKVMQTKNNY
SLKWTRASGEGEAEGLGIFNGDVGYIEDIDEEKETIQILFDNERRVIYENLYLDEIDLAY
AVTIHKSQGSEFPVVIMPAFKGPPLLMNRNLLYTGITRAKRLVVLVGSLKAINFMVQNDK
IFERYSLLKWRISNVLDNEIINEE |
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| NT seq |
2235 nt +upstreamnt +downstreamnt
atgcaggaaatacagggatttatagaggatatactttttaaaaatgatgaaaatgggtat
gtagtggcaaaaataagaaagaagaaagagcttataaccatagtcggatgtatgccctac
ataacagaaggacaaaacttaaaattaaaaggtgaatgggtaattcatccacaatttggt
aatcaattcaaagtagaaatatgtgaagaaatagtacccgatactgtagctggtatagaa
agatatttatcctcaggaatcatatcaggtataggcccagtgactgcaaaaaaaattgtg
aaaaaatttggagaagaaacattaaatatattagacaataatatagaaagattaacagat
atagagggaataggaaaaaagaagatagaaataatatatgattcctatataaaacaaaat
gaagtgcgaaatataatgatgttttttcaaaattacggggttacacctaaccaatgcatg
aaagtttataaaagatttggagaaaattctatatcaatagttaaagagaatccatatgta
cttacagaagaaataagaggaataggttttaaaacagcagataaaatagctagaagctta
ggaatagcctctaattcaccctttagaattcagagtggaataaattatataataaatgga
ttctgtagtttaggaaatacttatatgcctttagagaagcttataagcgaggctatggac
atattaggggtaagagaagaagaaatacatgaaaatatatataataatatagcagaaaat
aaattaaagatagaaaaagtaaaagaacaaagctgtgtttttactctaccgtattattat
tgcgaattaggagttacaaaaaaaatacttagtttatctttgtcacaatatgataattta
aatataaatatagaagacgaggtattgaattttgaaaaaaataataatataaaatttcat
gattctcaaagagaagctataaaaggtgccttagaaaatggagtagaaataataacagga
ggccctggtacaggaaaaacaactattattaattgtataacagagatatttgaaaaagct
aatatgaaagtttatatggcagcacctacaggaagagcggctaaaagaatgtctgaaacc
acaggtagagaagctaaaacaatacataggatgttagaaatgggtgtatctgatgatgac
acagaagaagttttttctaaaggtgaagaaactcctttagaatgtgatgtagtaataata
gatgaagcttccatgatagatataatattaatgaatacactgttaaaggccatagcttta
ggtacaagaataataatagttggggatgtagatcaacttccttcagtaggtccaggaaat
gtattaagagatttaatagaaagtaagtgtgtaaaggtagttagattaaaggagatattc
aggcaatctaaagaaagcatgattatagtaaatgcccatagaataaatgatggagagatg
ccaattataaataaaaaagataaagatttttattttatagaatgtagtgaacctaaaaaa
atagttaatacattattagaactttcaaatagaagattacctaaatttaataaaagctgg
cataaaattcatgatatacaaatactatctccaatgagaaagggagttctaggagtttct
agcttgaataaggaattacagtctgttttaaaccctaaaaatgattcaaaaaaagaaatg
gaatttaaggattatatatttagagtaggagataaagttatgcaaaccaaaaacaactac
tctttaaagtggaccagagcaagtggcgagggggaagcagaagggttaggaatatttaat
ggagatgtaggatatatagaggatatagatgaagaaaaagaaacaattcagattttattt
gataatgaaagaagagtaatatatgaaaatttatatttagatgagatagatttagcttat
gctgtgactattcataaaagtcaaggtagcgaatttccagtagtaattatgccagctttt
aaaggtccaccacttctaatgaatagaaatttattgtatacaggaataacaagagcaaaa
aggcttgttgtcttggtaggatctttaaaagctattaattttatggtacagaatgataaa
atttttgaaagatactctcttttaaagtggcgtataagtaatgttttagataatgaaatt
ataaatgaagaataa |
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