Clostridium botulinum A3 Loch Maree: CLK_3433
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Entry
CLK_3433 CDS
T00670
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl03030
DNA replication
cbl03430
Mismatch repair
cbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLK_3433
03430 Mismatch repair
CLK_3433
03440 Homologous recombination
CLK_3433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbl03032
]
CLK_3433
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_3433
Enzymes [BR:
cbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLK_3433
DNA replication proteins [BR:
cbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLK_3433
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLK_3433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
F-box
Motif
Other DBs
NCBI-ProteinID:
ACA54300
LinkDB
All DBs
Position
298087..299016
Genome browser
AA seq
309 aa
AA seq
DB search
MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMRFMPINIGIHGIRPRM
VQDELEFDKIWGKIKHYFNNNLVTAHNASFDISVLRNTLKLYNIKMPSFDYICTMKLSKN
FYSNIDNVRLNTVNNFLGYKFKHHDALADAMACSNILLNISKELNSKNINEISKLVGVTL
GYVNENGYKPSSTKGRILKRSNRQASKENKKIIENFNFTAFKEEVVVFTGRLASMTRDEA
IILVRKLNGTVGSSVTKRTTYLVTNTNDIEDLNREEMSNKLKKATDLRKKGQNIKFLNEE
AFLQKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagctatagattttgaaactgctaatgaaaaaagaaatagtccatgctct
atagggattgtggttgtgaaagatggggagattgtagaaaaagtacattatttaataaag
cctaaggaaatgagatttatgccaataaatattggaattcatggaataaggccacgcatg
gtccaggacgaattagagtttgataaaatatggggtaaaattaagcattattttaataat
aatttagtaacagctcataatgcttcctttgatatatctgtattaagaaatacattaaag
ctttataatataaaaatgccaagttttgattatatatgtacgatgaagctatctaaaaat
ttttatagtaacattgataatgtaagattaaatacagtaaataattttttagggtacaag
tttaaacatcatgatgctttggcagatgcaatggcatgtagcaatattctacttaatata
tcaaaggaattaaattcaaagaatattaatgaaatatcaaaattagttggagtgacttta
ggatatgtaaatgaaaatggatataaaccatcttccactaaaggaagaattttaaaaaga
tctaatagacaagcctcaaaggaaaataaaaagataatagaaaactttaattttactgca
tttaaagaagaggttgttgtatttacaggtagattagcttctatgacaagagatgaagca
attatattagttagaaagcttaatggaacagtaggaagctctgtaactaaaaggacaaca
tatttagttacaaatacaaatgatatagaggatttgaatagagaagaaatgagcaataag
cttaagaaagccacagatttaaggaaaaaaggccagaatataaaatttttaaacgaagag
gcattcctacaaaagtgtaaagaaaaataa
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