Campylobacter blaseri: CBLAS_0603
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Entry
CBLAS_0603 CDS
T06820
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbla
Campylobacter blaseri
Pathway
cbla03420
Nucleotide excision repair
cbla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBLAS_0603
03430 Mismatch repair
CBLAS_0603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbla03400
]
CBLAS_0603
Enzymes [BR:
cbla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBLAS_0603
DNA repair and recombination proteins [BR:
cbla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBLAS_0603
MMR (mismatch excision repair)
Other MMR factors
CBLAS_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QKF85795
LinkDB
All DBs
Position
complement(586239..588311)
Genome browser
AA seq
690 aa
AA seq
DB search
MQSAILKELNDEQKKAATHVDGPMLILAGAGSGKTKTITTRLAYLISEVGIPPSSTLTLT
FTNKAANEMRQRALSMIDNKNSQTPPLLCTFHKFGLLFLKFYISKLNRKNNFLIIDTDDK
KKIIKSFESDIATSILASEISKFKNSLISADEALENANLFSDDLKKEASGYYKKVANVYK
KYEDTLRSDNLVDFDDLLVLPYQILSQNPDLCDDISNRYQYIMVDEYQDTNDLQFKLLSK
LCKNHNNLCVVGDDDQSIYGWRGARVENILNFKDQFENVKIIRLEKNYRSSQHILNAANN
LIDYNRNRLGKKLTSTKEKGSEIEIYQSDDENYEANKIAKKITKLISNGVDPKEIAVLYR
VNALSRALEDGLTKARIPYKMVGGMKFYERAEIKDAISYIRLILNNNDDFSLRRIINRPK
RGLGKVSLAKIEKIAFDNKLSLFNAIATLDPSDVSKKSFTELGKFVENITNLNKMESLYD
LINELESNFGLKEYYKELSDGGDRVANIDEFYAMLKDEIINNANFDLEEFLNELSLTSEQ
DALSDEAISIMSVHASKGLEFEYLFVIGLEEGFFPLISDGNDIEEERRLGYVAITRAKKE
LVLSHSNSRFYRGRRERLDKSRFLSEAGLCEGSLKLEKTADFKKGDLVKHKLFGIGRVTS
VTKVKKDSKLKINFGGIFREIMSNFVEKVA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgctattttaaaagagttaaacgatgagcaaaaaaaggcagccacacatgta
gatggtcctatgcttatactagcaggcgcaggaagtggcaaaacaaaaactataacaaca
agacttgcttatttaatctctgaggttggcattcctccaagttcaactttaacacttact
tttacaaacaaagcagcaaacgagatgagacaaagagctttatctatgatagacaacaaa
aactctcaaaccccacccctactctgcacttttcataaatttgggcttttgtttttaaaa
ttttatatatcaaaactaaatagaaaaaataattttttgataatcgatacagatgataaa
aagaaaataataaaaagttttgaaagtgatatagcaacttcaattttagcaagtgaaatt
tctaagtttaaaaactctcttataagcgcagatgaagctttagaaaatgcaaatcttttt
agcgatgatcttaaaaaagaggcaagtggatactataaaaaagttgcaaatgtctataaa
aaatatgaagatactttacgcagcgacaatttagtagattttgatgatttactagttttg
ccatatcaaattctatcacaaaaccctgatctttgtgatgatatatcaaatagataccaa
tatataatggtagatgaatatcaagacaccaatgatctgcaatttaaactattaagcaaa
ctttgtaaaaatcacaacaatctatgcgttgttggcgatgatgatcaaagcatttatggt
tggaggggagctagagttgaaaatatcttaaatttcaaagatcaatttgaaaatgtaaaa
atcataagacttgaaaagaattaccgctcatcgcaacacattttaaatgcagcaaataat
ctaatagattacaacagaaatagacttggtaaaaaacttacaagcacaaaagaaaaaggc
agtgagatagagatatatcaaagcgatgatgagaattatgaagcaaacaaaatagctaaa
aaaatcactaaacttataagtaacggggtagatcctaaagagattgcagtgttataccga
gtaaatgctctttcccgtgccttagaagatggccttacaaaggctaggatcccatataag
atggtaggtggaatgaagttctacgaaagagctgagataaaagatgcaattagctatata
agacttattttaaacaataacgatgatttttctttaagaaggataatcaatagaccaaaa
agagggcttggcaaagttagtttagcaaagatagaaaaaatagcatttgataataaatta
tctctttttaacgccatagcaaccctagatccaagcgatgttagtaaaaaaagctttacc
gagttaggcaaatttgtagaaaatatcacaaatttgaataaaatggaatctttatatgat
ttaataaacgagcttgagagcaactttgggctaaaagaatattataaagaattatctgat
ggcggagatagagttgctaacattgatgagttttatgcaatgcttaaagatgagataata
aataatgctaatttcgacttagaggagtttttaaatgaactaagccttacaagcgaacaa
gatgcattaagtgatgaggctatttcaataatgagcgttcatgctagtaaaggcttggag
tttgaatatctctttgtaataggtcttgaagaaggctttttcccactaataagcgatggt
aatgatatagaagaggaaagacgcttaggatacgtagcaattacgagagctaaaaaagag
ctagttcttagccactcaaatagtagattttatagaggaagaagagaaaggcttgataaa
agtagatttttaagtgaagctgggctatgcgaaggatcattaaagcttgaaaaaactgct
gattttaaaaagggagatttggtaaagcataaactatttggaataggaagagttacaagt
gtcaccaaagttaaaaaagactcaaaactcaagataaatttcggtggtatatttcgtgaa
attatgtctaattttgtagaaaaagtcgcatga
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