KEGG   Campylobacter blaseri: CBLAS_0695
Entry
CBLAS_0695        CDS       T06820                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cbla  Campylobacter blaseri
Brite
KEGG Orthology (KO) [BR:cbla00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CBLAS_0695 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbla03021]
    CBLAS_0695 (rpoD)
Transcription machinery [BR:cbla03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CBLAS_0695 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 MMR_HSR1_Xtn MCR_beta_N FAM176
Other DBs
NCBI-ProteinID: QKF85887
LinkDB
Position
complement(682082..683938)
AA seq 618 aa
MTAKKQTTTKEIFDEIEEIFKENQKEYVTYEEIISYFDKAPTATNVKKIESFMKKYKVKI
ISSAKRAKIRNHQDAKKRAQEAQRMMDENQDEDFDVTNDTDLLEWSKSDSPVRMYLREMG
QIPLLTKEEEVEISKRIELGEDIIIDAFCSVAYLIDFILDYKEPLINRERRVKELFKSFD
EDTSDDEDEDDIDEENEKPKNTQKNDKRAIKVTQSFKALEKAKKDWQKYETRYKDELENS
EENLGIMFNYIFKKKILKEKLMELGPTSKLINEIVKSMETSLKSDDEFDKELKRLEYKLP
LFSKELKENHASILKDITKLSKEEIAERVPEATMVSTYVDIKKLFQTKEASEDSFDLDPI
RLKHILEQIKRGKNISDSAKGKMARSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAV
DKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINKINKINRQYLQETGK
EPDVNVIAEEIGLSVDKVKQVIKIAKEPISLEAPIGNEDDGKFGDFVEDKSSLSPMDNIL
KDDLKEQIDDVLDQLNEREKAVIRMRFGLLEDESDRTLEEIGKELNVTRERVRQIESSAI
KKLKHPKVGRKLKNYIEG
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgactgctaaaaaacaaactacaactaaagagatatttgacgaaatagaagagattttt
aaagaaaatcaaaaagaatatgttacttatgaagaaattataagctattttgacaaagcg
ccaactgctactaatgttaaaaaaatagaatcttttatgaaaaaatacaaagtaaagata
atatcttcagccaaaagagctaagataagaaatcatcaagatgctaaaaaaagagcacaa
gaagctcaaagaatgatggacgaaaatcaagatgaggactttgatgttacaaatgataca
gacttacttgaatggagcaaatcagatagtcctgttagaatgtatctaagagagatgggg
caaattccacttctaacaaaagaagaagaagttgagataagcaaacgcatagagcttggg
gaggacatcataatcgatgctttttgctctgttgcttatttgattgattttatacttgat
tataaagagcctttaatcaacagagaaagaagagtaaaagagcttttcaaaagctttgat
gaggatacttcagatgatgaagatgaagatgatattgatgaagaaaatgaaaaaccaaaa
aatactcaaaaaaatgataaaagagctataaaggtaactcaaagttttaaagcgctagaa
aaagctaaaaaagattggcaaaaatacgaaacaagatacaaagatgagcttgaaaatagc
gaagaaaatcttgggataatgtttaactatatattcaaaaaaaagattttaaaagaaaaa
ctcatggagcttggtccaacaagtaagcttataaatgagattgtaaaatcaatggaaacc
tcactaaaaagtgatgatgagtttgataaagagcttaaaagacttgagtacaaactacca
ctttttagcaaagagcttaaagaaaaccatgctagtatcttaaaagatataacaaaactt
agtaaagaggagatagcagagcgagttcctgaagcaaccatggtatcaacttacgttgat
attaaaaaactatttcaaacaaaagaggcaagcgaagatagttttgatctagatcctatt
aggttaaaacacattttagagcagataaaaagaggtaaaaacatctctgattcagcaaaa
ggaaagatggcaagatcaaatttaagacttgttgttagcattgctaaaagatatacaaat
agaggtttgccatttttggatctaattcaagaaggaaacatcggtcttatgaaagcggtt
gataagtttgaatataaaaaaggttataaattttcaacatatgccacatggtggataaga
caagctataagtagagctattgctgatcaagcaagaactattagaattccaatccacatg
atagaaacgattaataaaattaataaaatcaatagacaatatcttcaagaaacaggtaaa
gagcctgatgtaaatgtaatagcagaagaaattgggcttagtgttgataaggtcaaacag
gttattaaaatagcaaaagaaccaataagtcttgaagcacctattggaaatgaagatgat
ggtaaatttggagattttgttgaagataaatcatcactttcgcctatggacaatatctta
aaagatgatttaaaagagcaaatagatgatgttttggatcaactaaatgagcgtgaaaaa
gcagttattagaatgcgctttgggctactagaagatgagagtgatagaacactagaagag
ataggcaaagagctaaatgtaacaagggagcgcgtcagacaaattgaaagctctgctatt
aaaaaattaaaacatccaaaagttggcagaaaacttaaaaactacattgaaggctaa

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