Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_01410
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Entry
IPM89_01410 CDS
T10208
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00521
Streptomycin biosynthesis
cbly00523
Polyketide sugar unit biosynthesis
cbly00541
Biosynthesis of various nucleotide sugars
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01250
Biosynthesis of nucleotide sugars
Module
cbly_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IPM89_01410 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IPM89_01410 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IPM89_01410 (rfbC)
Enzymes [BR:
cbly01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IPM89_01410 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQS54551
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All DBs
Position
303718..304278
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AA seq
186 aa
AA seq
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MNVIATELPGVLLLEPKAFGDARGFFMETWQAARYREAGMPERFVQDNHSRSRRGVLRGL
HYQLTQPQGKLVWVTRGAVFDVAVDIRRGSPGFGQWYGCVLDDVDHRQLYIPPGFAHGFC
VLSEEADFFYKCTDYYHPSSECGIAWDDPEIGIAWPLREGIALSAKDQRNRPLAAQRPED
LPVYEG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgattgcgacggaactgcctggcgtgttgctgctggagccgaaggctttcggc
gacgcgcgcggcttcttcatggaaacctggcaggcggcgcgctatcgcgaagccggtatg
ccggagcgtttcgtccaggataaccattcgcgctcgcgccgcggcgtgctgcgcggtttg
cactatcaactgacgcagccacagggcaagctggtgtgggtgacgcgcggggcggtgttc
gatgtggcggtggacatccgtcgcggctcgccgggcttcggccagtggtacggctgcgtg
ctggatgatgtggaccatcgccagctctacattccaccagggttcgcccacggtttctgc
gtactgtcggaggaagcggatttcttctacaaatgcaccgattactaccatccatcttcg
gagtgcggcatcgcctgggacgatcccgaaatcggcatcgcctggccgctgcgggagggg
attgcgctgtcggccaaggaccagcgtaaccggccgctggccgcgcagcgtcccgaagat
ctgccggtttacgagggttga
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