Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_03340
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Entry
IPM89_03340 CDS
T10208
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00020
Citrate cycle (TCA cycle)
cbly00640
Propanoate metabolism
cbly00660
C5-Branched dibasic acid metabolism
cbly00720
Other carbon fixation pathways
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01200
Carbon metabolism
Module
cbly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cbly_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IPM89_03340 (sucD)
00640 Propanoate metabolism
IPM89_03340 (sucD)
00660 C5-Branched dibasic acid metabolism
IPM89_03340 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
IPM89_03340 (sucD)
Enzymes [BR:
cbly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IPM89_03340 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QQS54889
LinkDB
All DBs
Position
734149..735027
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AA seq
292 aa
AA seq
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MSILIDKNTKVICQGFTGSQGTFHAEQAIAYGTNLVGGISPGKGGSTHLDKPVFNTVYEA
VAATGAEASMIYVPAPFAGDAILEAADAGIKVIACITEGIPVTDMLKVKATLQTSYPSVY
LIGPNCPGVITPGGCKMGIMPGHIHLPGKIGIVSRSGTLTYEAVWQTTQTGLGQSTCIGI
GGDPIHGMSFLDVLKLFKDDPQTEGIVMVGEIGGSAEEEAAEYIKANIKKPVVAYIAGVT
APPGKRMGHAGAIIMGGKGTAADKFAALEAAGAKIVRSPADIGAAMKAYFPG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttgatcgacaaaaacaccaaggttatctgccaggggttcaccggctcgcag
ggcaccttccacgctgaacaggccatcgcttacggcaccaacctggtcggcggcatcagc
cccggcaagggcggcagcacccatctggacaagccggtgttcaataccgtgtacgaagcg
gttgccgccaccggcgccgaagccagcatgatctacgtgccggccccgttcgccggcgat
gccatcctggaagcggccgacgccggcatcaaggtcatcgcctgcatcaccgagggtatt
ccggtgacggacatgctgaaggtcaaggctaccctgcagaccagctatccgagtgtctat
ctaatcggccccaactgccccggcgtgatcacccccggtggctgcaagatgggcatcatg
cccggccacattcacctgcccggcaagatcggtatcgtctctcgctccggcaccctgacc
tacgaggcggtttggcagaccactcagaccggtcttggccagtccacctgcatcggtatt
ggcggcgacccgatccatggcatgagcttcctcgacgtgctgaagctgttcaaggacgat
ccgcagaccgagggcatcgtgatggtcggcgagatcggtggcagtgccgaggaagaagcc
gccgagtacatcaaggccaatatcaagaaaccggtggtcgcctacatcgccggtgttacc
gcgcctcccggcaagcgcatgggccacgccggcgccatcatcatgggcggcaagggcacg
gcggccgacaagttcgcggcgctggaagccgccggtgccaagatcgtccgctcgccggcc
gacatcggcgcggcgatgaaggcgtatttccccggctga
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