Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_04230
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Entry
IPM89_04230 CDS
T10208
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbly03032
]
IPM89_04230 (gyrA)
03400 DNA repair and recombination proteins [BR:
cbly03400
]
IPM89_04230 (gyrA)
Enzymes [BR:
cbly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IPM89_04230 (gyrA)
DNA replication proteins [BR:
cbly03032
]
Prokaryotic type
DNA Topoisomerases
IPM89_04230 (gyrA)
DNA repair and recombination proteins [BR:
cbly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IPM89_04230 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
QQS55039
LinkDB
All DBs
Position
941988..944600
Genome browser
AA seq
870 aa
AA seq
DB search
MTDIAKEILPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMARVAHELLADLDKETVDFVPNYDESEREPSVFPTRLPNLLVNGSSGIAVGMAT
NIPPHNLTEVVDACMALIDDPLLNIAELMRYIPGPDFPTAALINGASGIREAYETGRGRV
RMRARTEIETDELRNRQAIIVTELPYQVNKARLIEKIAELVKDRKLEGITELRDESDKDG
LRIYIELRRGEAAEVVLNNLFLHTSLQCVFGINMVALVEGQPRLLNLKQILEAFLAHRRE
VVVRRTVFDLRKARERAHIVEGLAVALANLDPLIALIRAAADPATARVALLEQAWMPGAV
TDLLARSGAAASRPEDLPAECGLSEVGYRLSPAQAQAILDLRLHRLTGLEQRKLLDEYQD
LLSRIQDYLEILTVPERLTAVIRAELLELRAQYSDARRTQILPDEQNLNLEDLINEEAMV
VTLSHAGYVKSQPLSLYRAQKRGGRGRAATTFKEEDFVDKLFVASTHDTILCFSNYGKVY
WKKVYELPQASRTARGRPIVNLLPLEEGERINAVLAVREFSDDHDVFFATANGTVKKTPL
SAYSRPRPSGIIAIDLREGDQLVNVALTHGQSDVMLFTDAGKVLRFAETEVRDMGRSACG
VRGIRLGAEQKVIALIVVGEGTVLTVTENGYGKRTPVDDYPRRGRGGQGVISIQTSERNG
RVTGAVQVESDHDIMLITDGGTLVRTRVEEISLVSRNTQGVKLISLQGDEKLVGVEKIES
IGEVDVPNDVSVDDESAPPEDAQDDEEPAA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatcgccaaagaaatcctgccggtcaatctggaagacgaaatgcggcagtcc
tacctcgattacgccatgagcgtgatcgtcgggcgggcgctgccggacgtgcgcgacgga
ctgaagccggtgcatcggcgggtgttgttcgccatgagcgaactgggcaacgactggaac
aaaccgtacaagaaatccgcccgcgtggtcggtgacgtgatcggtaagtaccacccacac
ggtgattccgcggtctacgacaccatcgtgcgcatggcgcagcccttttccctgcgctac
atgctggtggacgggcagggcaacttcggcagcatcgacggcgacgccccggccgcgatg
cgctacaccgaagtgcgcatggcccgcgtcgcccacgaactgctggccgatctcgacaag
gaaacggtcgatttcgtccccaattacgacgaatcggagcgcgagccgtcggtcttcccg
acccgcttgcccaacctgctggtcaacggctcctccggcatcgccgtcggcatggccacc
aatatcccgccgcataatctgaccgaggtggtggatgcctgcatggcgctgatcgacgac
ccgttgctgaatatcgccgagctgatgcgctacattccggggccggatttccccaccgcc
gcgctgatcaacggcgccagcggcatccgcgaagcctacgagaccggtcgcggccgggtg
cgaatgcgcgccaggaccgaaatcgaaaccgacgagctgcgcaaccggcaggcgatcatc
gtcaccgagctgccctatcaggtgaataaggctcggctgattgaaaaaatcgcggagctg
gtcaaggaccgcaaactggagggcatcaccgaactgcgcgacgaatccgacaaggacggc
ttgcgcatctatatcgaattgcgacgcggcgaggccgccgaggtcgtgctgaacaacctg
tttctgcacacctcgctgcaatgcgtgttcggcatcaacatggtggcgctggtcgaaggc
cagccgcgcctgctcaacctcaagcagattctggaagccttcctggcgcaccgccgcgaa
gtggtggtgcggcgcaccgtcttcgatctgcgcaaggcccgcgagcgggctcacatcgtc
gaaggattggcggtggcgctggccaacctcgatcccctgatcgcgctgatccgcgccgcc
gccgatcccgccaccgcccgcgtcgcgctgctggagcaggcatggatgccgggtgcggtc
accgatctgttggcccgctccggcgcggcggcgtcgcggccggaggatctgccggcggaa
tgtggcctgagtgaagtcggctaccggttgtcgccggcccaggcgcaggcgattctggat
ttgcgactgcatcggctgaccgggttggaacagcgcaaactgctggacgagtatcaggat
ttgctatcccgcatccaggactacctggagatcctcaccgtgccggaacgcttgacggcg
gtgattcgcgccgaactgctggagctgcgcgcccagtacagcgacgcccgccgcacccag
atcctgcccgacgaacagaatctgaatctcgaagacctgatcaatgaagaggccatggtg
gtcacgctgtcgcacgccggctacgtcaagtcgcagcctttgtccttgtatcgggcgcaa
aaacgcggcgggcgcggccgggcggccaccaccttcaaggaagaggattttgtcgataaa
ctgtttgtcgctagcacccacgacaccatcctttgtttctccaactacggcaaggtgtac
tggaagaaagtctacgagctgccgcaggccagccggaccgcgcgcggtcgccccatcgtc
aacctgctgccgctggaagagggcgaacggatcaacgcggtattggcggtgcgcgagttc
agcgatgatcatgatgtgttcttcgccaccgccaacggcacggtcaagaagacgccgcta
tcggcctattcccggccgcgtcccagtggcatcatcgccatcgacctgcgcgagggcgac
cagttggtcaacgtggcgctgacccacggtcagagcgatgtgatgctgttcaccgacgcc
ggcaaggtgttgcgttttgccgagaccgaggtgcgcgacatgggtcgctccgcctgtggg
gtgcgcggtatccgcctgggcgccgagcagaaggtcatcgccctgatcgtggtgggtgaa
ggcacggtgctgaccgtcaccgaaaacggttacggcaagcgcacgccggtcgatgactac
ccacgccggggccggggtggccagggcgtcatttccattcagacctccgagcgtaacggc
cgggtcaccggcgcggtgcaggtcgagagcgaccacgacatcatgctgattaccgacggg
ggtacgctggtgcgcacccgggtcgaagagatttcactggtgagtcgcaacacccagggg
gtgaagctgatcagcctgcaaggcgatgagaagctggtcggagtcgagaaaatcgaaagc
atcggcgaggtggacgttcccaacgatgtatcggtcgatgacgaaagcgcgccgccggaa
gacgcccaggatgacgaggagccggcggcatga
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