Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_04735
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Entry
IPM89_04735 CDS
T10208
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
IPM89_04735
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Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_CusB
BSH_CzcB
Beta-barrel_AprE
BSH_YknX
Beta-barrel_RND
Biotin_lipoyl
RND-MFP_C
CzcB_C
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QQS55794
LinkDB
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Position
complement(1046554..1047849)
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AA seq
431 aa
AA seq
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MQPDPDLAKIIDAGSSNSRLGSLIRWLLAASVLAALGVGGVAFLRSSAETQATPRYQTET
VSRGKLRVTVSATGKLAPVNEVEVGSELSGTIEAVFVDYNDRVKKGQMLARLDLAKLQDA
TAKAKAALASADAKVLQTVATVKEVRAHLKRLRQVAKLSGGKVPSPAELETAEATQQRAI
ADEASARAAVNEARATLRSSETDLTKASIRSPIDGVVLARSVEPGQTVAASLQAPVLFTL
AENLAQMELQVDVDEADVGQVHEGQAATFSVDAYPNRRFPARISLVRFGPETVDNVVSYK
TILNVDNSDLSLRPGMTATAEIVTAERENVLLVPNAALRFTPPKPAANAQPSSGGGLLAS
LLPRPPRSAVKKSVTETPDKNAAQRVWVLGDDQPMAIPVITGQTDGRTTEVTGAGLAAGM
PVITARLSATP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgatcccgatctggcgaaaatcatcgatgcgggaagttcgaacagtcgcctt
ggcagcctgatacgttggttgctcgcggccagcgttctcgccgcattgggcgtcggtggt
gtcgcgttcctccgttccagtgccgaaacccaggcgacgccccgctaccagaccgaaacg
gtcagccggggcaagctgcgggttacggtttcagcgacgggtaaactggcgccggtcaac
gaagttgaggtaggcagcgagttgtccggcaccatcgaagcggtgttcgtggactacaac
gaccgggtgaaaaaaggccaaatgctcgctcgcctggatctcgccaagctccaggacgcc
actgccaaagccaaggcggcgctggcctcggccgacgccaaggtgttgcaaaccgtggcg
accgtcaaggaagtacgcgcccatctcaaacgcttgcggcaagtggccaaactgagcggc
ggcaaggtgccttcaccggcggaactggagaccgccgaggccacccagcaacgcgccatc
gccgatgaggccagcgcgcgagcagccgtgaacgaagcccgcgccaccctccgttccagc
gaaaccgatttgaccaaggcctccatccgttcgcccatcgacggcgtggtgctcgcccgc
tcggtggagccagggcaaacggtggccgcctcgctgcaagcgcccgtgttgttcacgctc
gccgaaaatctggcgcaaatggaattgcaggtggatgtggacgaagccgacgtgggtcaa
gtacacgaagggcaagccgcgacgtttagcgtggacgcctatcccaaccggcgctttccc
gctcgcatcagtctggtgcggttcggtcccgagaccgtggacaacgtggtcagttacaag
accattctcaatgtggataacagcgatctcagcctgcgtcccggcatgaccgccacggcg
gaaatcgtcaccgccgaacgggaaaacgtgctgctggttccgaatgcggcgttgcgcttc
accccgccaaaaccggcggcgaatgcgcaaccgagcagcggcggcggtttgttggccagc
ttgctgccccggccgccgcgctcggcggtcaagaaatccgtgacggaaacccctgacaaa
aacgccgcgcagcgagtgtgggtgttaggcgacgatcagccgatggcgattccggtgatc
accggccaaactgacggacgcacgaccgaggtcacgggcgcgggtttggcggcgggcatg
ccggtgattaccgcccgactgagtgcgacgccttga
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