Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_05045
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Entry
IPM89_05045 CDS
T10208
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00860
Porphyrin metabolism
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01240
Biosynthesis of cofactors
Module
cbly_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IPM89_05045 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbly04147
]
IPM89_05045 (hemB)
Enzymes [BR:
cbly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
IPM89_05045 (hemB)
Exosome [BR:
cbly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
IPM89_05045 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QQS55185
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All DBs
Position
1112976..1113995
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AA seq
339 aa
AA seq
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MSRFAQIIPGQFPGVRPRRMRRDDFSRRLVRETVLTPADLIQPLFVIEGEKRREPVASMP
GVERLSIDELLREAETLAALGVPAVALFPVTPPEAKSLDAAEAYNPKGLAQRVVRALKAA
IPELGVITDVALDPFTSHGQDGLVDETGYVLNDETVAVLVRQALSHAEAGADIVAPSDMM
DGRIAAIRETLESNDFIHTRILAYSAKYASSFYGPFRDAVGSAGALGKGDKTSYQMDPAN
SDEALREVALDLEEGADIVMIKPGLPYLDIVRRVKDQFAVPTFVYQVSGEYAMLLAAARN
GWLDEQAAAMESLLAIKRAGADAILSYFAGRAAGWLRAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgatttgctcagatcattcccggccagtttcccggcgttcgcccgcgccggatg
cgtcgcgacgacttctctcgccggttggtgcgggaaaccgttctcactcccgccgatctg
atccagccgctgttcgtgatcgagggcgagaagcggcgcgagccggtcgcctcgatgccg
ggagtggagcgcttgagcatcgacgaactgttgcgcgaggccgagacgctggcggccctt
ggcgtgccggcggtggcgttgtttccggtaacgccgcccgaggccaagtcgctggacgcc
gccgaggcgtataacccgaaaggtctggcgcagcgggtggtgcgcgcgctcaaggcggcg
attccggaattgggcgtgatcaccgacgtggccctggatccattcaccagccatggccag
gacgggctggtggacgaaaccggttacgtgctgaacgacgaaacggtggcggtgctggtg
cgacaggcgctgtcgcacgccgaggcgggcgcggacatcgtggcgccttcggatatgatg
gacgggcgtatcgccgccatccgcgagacattggagtccaacgatttcatccatacccgg
attttggcctattccgccaagtacgcctccagcttttacggaccgtttcgcgatgcggtc
ggctcggctggcgcgctcggcaagggcgacaaaaccagctatcagatggacccggccaac
agcgacgaggcgctgcgcgaagtagctctggatctggaggagggcgccgatatcgtgatg
atcaagccagggttgccttatctggatatcgtgcgtcgagtcaaggaccagttcgccgtg
cccaccttcgtgtatcaggtgagcggcgaatacgccatgctgctggcggcggcccgcaac
ggttggctggacgagcaggcggcggcaatggagtcgttgctggcgatcaagcgggctggg
gccgacgcaatattgagctatttcgccggtcgggcagccggttggctgcgggcggcatga
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