Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_05105
Help
Entry
IPM89_05105 CDS
T10208
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00300
Lysine biosynthesis
cbly00470
D-Amino acid metabolism
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IPM89_05105
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IPM89_05105
Enzymes [BR:
cbly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IPM89_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QQS55194
LinkDB
All DBs
Position
complement(1125509..1126744)
Genome browser
AA seq
411 aa
AA seq
DB search
MGKTRPTHWPMSQFPVVDDCLRVSGMPLTQLAARVGQTPFYAYERRLLDQRVALLRDALP
PAIELHYAVKANPMPTVVQHMAGLVDGLDVASLGELRVALDAGANPARISFAGPGKRPPE
LAAAIAAAITVNLESPSELETLARLGQEQGRRPKVAVRINPDFELKASGMKMGGGPKPFG
VDAEQVPALLRRIGELELDFQGFHIFTGSQNLRAEAIVEAHDRSFELALRLAADAPGAMR
LLNIGGGFGIPYFPGDRPLDLAPIAANLERWLPVVKARLPQVQVVLELGRYLVGEAGIYV
AEVVDRKVSRGHTFLITNGGLHHHLAASGNFGQVIRKNYPVVVGNRVVGTERETVSVVGP
LCTPLDILADRMDLAKADIGDLIVVFQSGAYGLTASPTAFLSHPPCLEVLV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaacccgtcccacgcactggcccatgagccaatttccggtcgtcgacgactgc
ttgcgggttagcggcatgccgctgacccaactggcggcgcgggttggacaaaccccgttt
tatgcctacgagcgccggctgctggaccaaagagtggcgctgctgcgcgacgcgctgccg
ccggccatcgaactgcactacgcggtcaaggccaacccgatgccgacggtggtccagcac
atggccggattggtggacgggctggacgtcgcctcactgggcgaattgcgcgtcgcgctg
gatgccggggcgaacccggcccggatcagttttgccggccccggcaagcgcccgccggaa
ctggccgccgccatcgccgccgccatcaccgtcaacctggaatcgcccagcgaattggaa
acgctggcgcggctcgggcaagaacagggtcggcggcccaaggtcgcggtgcggatcaat
ccggattttgagttgaaagcctccgggatgaagatgggcggaggacccaaaccgttcggg
gtggacgccgagcaggttccggccctgctgcgacggatcggcgagctggaactggatttt
cagggctttcacatcttcaccggctcacagaatctgcgcgccgaggccatcgtcgaggcc
cacgaccgcagcttcgagctggccctgcggctggcggccgacgcgccgggagcgatgcgc
ctgctcaacatcggcggcggtttcggcattccctacttccccggcgaccgaccgctggat
ctggcgccaatcgccgccaatctggaacgctggctgccggtggtcaaggcgcggctaccc
caagtgcaagtggtgctggaactgggccgctatctggtcggcgaagccggtatctacgtg
gccgaggtggtggaccgcaaagtgtcgcgcggccataccttcctgatcaccaatggcggt
ttgcatcatcacttggcggcatccggcaacttcggccaggtgatccgcaagaattacccg
gtcgtggtcggcaaccgggtcgtcggcaccgaacgggagacggtctcggtggtcgggccg
ctgtgcacaccactggatattctggctgaccggatggatctggcgaaagccgacatcggt
gacctgatcgtggtgttccaatccggtgcttatgggctgaccgccagcccgaccgcgttt
ctcagtcatccgccctgcctggaagtgctggtgtga
DBGET
integrated database retrieval system
