Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_06125
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Entry
IPM89_06125 CDS
T10208
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00300
Lysine biosynthesis
cbly00470
D-Amino acid metabolism
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IPM89_06125 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IPM89_06125 (lysA)
Enzymes [BR:
cbly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IPM89_06125 (lysA)
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QQS55377
LinkDB
All DBs
Position
complement(1364242..1365489)
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AA seq
415 aa
AA seq
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MDHFEYRDGRLHAEGVSVADIAATVGTPCYIYSRATIERHWRAFDQAFGEHPHLICYAVK
ANSNLAVLNVLAQMGSGFDIVSGGELERVLAAGGDPGKIVFSGVGKRRDELERALEVGIR
CFNVESEAELALLERVAAERGRRAPVSLRINPDVDADTHPYISTGLKQNKFGIEVERALA
VYARAAASPYLEVVGVDCHIGSQLTRVAPFVDALERVLALVARLKEQGIQLHHLDLGGGL
GIRYRDEEPPLPAEYAAALMERLRGRPYEILIEPGRAIVGNAGILVTRVELLKQGADKSF
AVVDAAMNDLLRPALYSAWQAIIPVEPRVQGQPRCYDVVGPICETGDFLGKDRALNIEPG
DLLAVRSAGAYGFAMSSNYNSRPRAAEVMVDGSRFQVVRRRETVAELYAGEAVWS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcgaataccgtgacggccggttgcatgccgagggtgtgtcggtcgccgac
atcgcggcgacggttggcaccccttgctacatttactcccgcgccacgatcgaacgccac
tggcgcgctttcgaccaggctttcggcgagcatccacatttgatctgctacgcggtcaag
gccaatagcaatctggcggtgctgaacgtgctcgcccagatggggtccggtttcgatatc
gtatccggcggcgagctggaacgagtgctggcggccggcggcgatcccggaaaaatcgtg
ttttcgggagtcggcaagcgtcgtgacgagctggagcgcgcgctcgaagtgggcatccgc
tgcttcaacgtcgaatccgaggcggagttggcgctgctggagcgtgtggcggcggaacgg
ggccggcgggcgccggtgtcgctgcgcatcaacccggacgtggacgccgatacgcatcct
tatatctccaccggactcaagcagaacaagtttggcatcgaggtggagcgggcgttggcg
gtttacgcgcgggccgccgcctcgccgtatctggaagtcgttggcgtggattgccatatc
ggctcgcagttgacccgggtggcgccgttcgtggatgcgctggaacgagtgctggcgctg
gtggcacggctgaaagagcaggggattcagcttcatcatctcgacctgggcgggggattg
ggcatccgctaccgcgacgaagagccgccgctgccggccgagtacgccgccgctctgatg
gaacgcctgcgcggccggccctacgaaatcctgatcgagccgggccgggccatcgtgggc
aacgccggcattctggtgacgcgcgtggaattattgaagcagggcgcggataagagtttc
gcggtggtggacgcggcgatgaacgacctgttgcgaccagcgctgtattcggcctggcag
gcgatcatcccggtcgagccgcgcgttcagggtcagccgcgctgctacgatgtggtggga
ccgatctgcgagactggcgactttcttggcaaggaccgggcattgaacatcgaaccgggt
gatttgttggcggtgcgttccgccggtgcctatggtttcgccatgagttccaattacaat
tcccggccccgcgccgccgaggtgatggtggacggtagccgtttccaggtggtgcgccgg
cgggagacggtggcggagctgtatgccggcgaagcggtgtggtcgtaa
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