KEGG   Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_07010
Entry
IPM89_07010       CDS       T10208                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cbly  Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly03020  RNA polymerase
Brite
Enzymes [BR:cbly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IPM89_07010 (rpoC)
Transcription machinery [BR:cbly03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IPM89_07010 (rpoC)
DNA repair and recombination proteins [BR:cbly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IPM89_07010 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: QQS55825
LinkDB
Position
1570307..1574551
AA seq 1414 aa
MKELLNPFKTFDEVEDFDAIRIGLASPEMIRAWSCGEVKKPETINYRTFKPERDGLFCAK
IFGPTKDYECLCGKYKRLKHRGVVCEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTQTLEKGQMLTDEAYLDAVEQYGDEFDAR
MGAEAVHRLLHTLDLKELVVKLRQEILECSSETKLKRLSKRLKLVESFLNSGNKPEWMVL
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRML
QEAVDSLLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGP
TLRLHQCGLPKKMALELFKPFIFSKLQFRNMSTTIKAAKKMVEREEPVVWDILEEVIREH
PVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLE
ARALMMSTNNILSPANGEPIIVPSQDVVLGLYYLTRERINAKGEGMVFSGLNEIHRAYES
GQVELHAWIEARLPLEEIDEAGQARTVPKRVKTTVGRVLLSDILPAGLPFELVNRALTKK
VVSRLINECYRRLGLKDTVIFADQLMYTGFHYATRSGSSIGFEDFQIPARKTELLEKAEQ
EVKEIDDQYTSGLVTKGERYNKVVDIWSRTNDQVAKAMMDNLGTETVIDREGKEVRQPSL
NPVFMMADSGARGSAAQIRQLAGMRGLMAKPSGEIIETPIKANFREGLSVLEYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVVTEPDCGTNEGLWMTPVVEEGDIKEPLRDRV
LGRTVAQDVFQPGGDDIAIPAGTLLDEQGVATLDDLGIDRIRVRSAITCRTRYGVCATCY
GRDLARGHRVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTTVSNSVQIKSRGTLR
LHKMKVAQRRDGNLVTVSRSGEITLVDDQGRERERYKVPYGAELTVKDGDAAEAGQVIAR
WDPYTHPIVTEVAGSVRFAEFEEGITVQRHADEMTGLTSLVVMDPKQRGAQGKDKRPLVR
LVDVHGNDLFIPGTSNLAQYPLPAGAIVNLADGAEVAVGDIVARIPQESSKTRDITGGLP
RVADLFEARKPKEQAILAEKSGIIEFGKETKGKQRLVIRDKGGDVLYEELIPKWRHVGVF
DGEYVEQGEMIADGEPNPHDILRLLGVQELAAYLTKEIQDVYRVQGVKINDKHIEVIVRQ
MLRKVDIIDPGETPFIKGEQIERTRGLEENDRAEAEGRVKAVWQPILLGITKASLATESF
ISAASFQETTRVLTEAAVRGLRDDLRGLKENVIVGRLIPAGTGLAYHLQRRQGWIPSQLT
LSSNMFESGESEVKVIGDDDKNDDSEVDSKDLTA
NT seq 4245 nt   +upstreamnt  +downstreamnt
atgaaagagctgctgaacccgttcaagaccttcgacgaggtcgaggacttcgacgccatc
cgcatcgggctagcctcgccggagatgatccgggcctggagctgcggcgaggtgaagaaa
cccgagaccatcaactatcggaccttcaagccggagcgcgacgggctgttctgcgccaag
atcttcggcccgaccaaggactacgagtgcctgtgcggcaagtacaagcggctcaagcac
cgtggagtggtctgcgagaaatgcggagtggaagtcactctggccaaggtacggcgcgag
cggatgggccatatcgaactggccagcccggtggcccatatctggttcttgaaatcgctg
ccctcgcgcatcggcctgttactggacatgaccctgcgcgacatcgagcgggtgctgtat
ttcgaatcctacgtggtcatcgaccccggcatgacgcaaacgctggaaaaaggtcagatg
ctcaccgacgaggcctatctggacgcggtcgaacagtacggcgacgagttcgatgcccgg
atgggggccgaggcggttcaccggttgctgcatacactggacttgaaagagctggtggtg
aaactgcgccaggaaatcctcgaatgcagctccgagaccaaactcaaacgcttgtccaag
cgcctcaagttggtggagtccttcctcaactccggcaataagccggagtggatggtattg
accgtgctgccggtactgccgcccgatctgcgaccgctggtaccgctggacggcggacgc
ttcgccacttccgacctcaatgatctctaccgccgggtgatcaaccgcaacaaccggctc
aagcgactgctggaactctcggccccggacatcatcgtccgcaacgagaaacgcatgttg
caggaagcggtcgactcgctgctggacaacggccgccgcgggcgcgccatcaccggcagc
aacaaacggccactgaagtcgctagccgacatgatcaagggcaagcagggccgtttccgc
cagaacctgctcggcaagcgggtggactactccggtcgttcggtgatcgtggtcggcccc
accctgcgcctgcatcagtgcgggctgcccaagaagatggcgctggagctgttcaagcca
ttcatcttcagcaagctgcaattccgcaacatgtccaccaccatcaaggccgccaagaaa
atggtggagcgcgaggagccggtggtgtgggacatcctggaagaggtgatccgcgagcat
ccggtgttgctcaaccgcgcgccgaccctgcaccgactgggcatccaggccttcgaaccg
accttgatcgaaggcaaggccattcagttgcacccgctggtctgcaccgccttcaacgcc
gacttcgacggcgaccaaatggcggtacacgtaccgctatccatcgaggcgcagctcgaa
gcccgggcgctgatgatgtccaccaacaacatccttagcccggccaacggcgagccgatc
atcgtcccctctcaggacgtggtcctcggcctgtattacctaacccgtgagcggattaac
gccaagggtgagggcatggtgttctccggtcttaatgaaatccatcgcgcctacgaaagc
gggcaggtggaacttcacgcctggatcgaggcacgcctgccgctggaagaaatcgacgag
gcgggtcaggcccgcaccgtaccgaaacgagtcaagaccaccgttgggcgagttttattg
tccgatatcctgccggccggcctgcccttcgaactcgtcaaccgggcgctgaccaaaaag
gtcgtatcccggttgatcaatgagtgctaccggcggctgggcttgaaggacaccgtgatc
tttgccgatcagttgatgtataccggttttcattacgccacccgctccggctcctcgatc
ggcttcgaagacttccagattccggccagaaaaaccgaactgctggaaaaagccgagcag
gaagtcaaggaaatcgacgaccagtacacctccgggctggtcaccaagggcgagcgctac
aacaaggtggtggatatctggtcgcgtaccaacgaccaggtcgccaaggcgatgatggac
aatctgggcaccgaaacggtgattgaccgcgaaggcaaggaagtccgccaaccctctctc
aaccccgtgttcatgatggccgactccggcgctcgtggttcggcggcgcagatccgccaa
ttggccggcatgcgcgggctgatggccaagccgtccggcgagatcatcgagaccccgatc
aaggccaatttccgcgaaggcttgagcgtgctggagtacttcatctccacccacggcgcc
cgcaagggtctggccgacaccgcgctcaagaccgccaactccggctacctgactcggcgc
ttggtggacgtggcccaggatctggtggtgaccgaaccggattgcggcaccaatgaaggc
ctgtggatgacgcccgtggtcgaggaaggcgatatcaaggaaccgttgcgcgaccgggtg
ctgggtcgaacggtggcccaggatgtctttcagccgggcggcgacgacatcgccattccc
gccggcaccctgctcgacgaacaaggcgtggcgacactcgacgacctcggcatcgatcgc
atccgggtacgctcggccatcacctgccggacccgctacggcgtgtgcgccacctgctac
ggccgcgacctggcgcgcggtcaccgtgtcaacagcggcgaggcggtgggggtgatcgcc
gctcaatccatcggcgaacccggcacccagctcaccatgcgcaccttccacatcggtggg
gcggcctcgcggaccacggtgagcaacagcgtgcagatcaaatcgcgagggaccttgcgg
ctgcacaagatgaaggtggcgcagcgacgggacggcaacctggtcacggtctcccgctcg
ggcgaaatcaccctggtggatgatcagggccgcgagcgggagcgttacaaggtcccctac
ggcgcggagctgacggtcaaggacggcgacgcggccgaggccggtcaggtcatcgcccgc
tgggacccctacacccatccgatcgtcaccgaggtggccggctcggtgcgctttgccgag
ttcgaggaaggcatcaccgtgcaacggcacgccgacgaaatgaccggcctgaccagcctg
gtggtgatggaccccaagcaacgcggcgcgcagggcaaggacaagcggccactggtgcgg
ctggtggacgttcacggcaacgatctgttcatccccggcaccagtaacctggcgcaatat
ccattgccggccggcgccatcgtcaacctggccgatggcgccgaggtggcggtgggcgac
atcgttgcccgcatcccgcaggaatcctccaagactcgcgacattaccggcggcttgccg
cgggtggccgacctgttcgaggcgcgcaagcccaaggaacaggccatccttgccgagaaa
tccggcatcatcgagttcggcaaggaaaccaagggcaagcagcgactggtgatccgcgac
aagggcggcgacgtcctttacgaggaattgatcccgaagtggcggcatgtcggcgtgttc
gacggcgagtacgtcgagcagggtgaaatgatcgctgacggcgagcctaatccgcacgat
atcctgcgcctgctcggggtgcaggaactggccgcctacctgaccaaggaaattcaggac
gtctaccgggtgcagggcgtcaagatcaacgataagcatatcgaagtgatcgttcgccag
atgctgcgcaaggtcgatatcatcgatccgggcgaaacgcctttcatcaagggcgagcag
atcgaacgcacccgagggctggaagagaacgatcgagccgaggccgaaggccgggtcaaa
gcggtctggcagccgatcctgctgggcatcaccaaggcatcactggccaccgagtcgttc
atctccgccgcctcgttccaggaaaccactcgggtgctgaccgaagcggcggtacgcggg
ctacgtgacgatctacgcggactgaaagaaaacgtgatcgtcggtcgcttgatccccgcc
ggtaccggtttggcctaccatctgcaacggcgacaaggctggatcccgagtcaactcacc
ctcagcagcaatatgttcgaaagcggcgaatccgaagtcaaagtcatcggcgacgacgat
aagaacgacgatagcgaggttgactcgaaagacctgaccgcatag

DBGET integrated database retrieval system