KEGG   Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_07530
Entry
IPM89_07530       CDS       T10208                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cbly  Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:cbly00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbly02044]
    IPM89_07530 (tssC)
Secretion system [BR:cbly02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IPM89_07530 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 TssC TPPII
Other DBs
NCBI-ProteinID: QQS55620
LinkDB
Position
complement(1687369..1688871)
AA seq 500 aa
MAETDTNAQAQPEAQTETVEASEFGSLLQREFKPKSDQAKQAVENAVHTLAEQALQHTTL
ISRDVLKSIESMIAAIDRKLSEQINLIMHHSEFQQLEGAWRGLSYLVNNTETDEMLKIRV
MNISKKELAKNLKKFKGVAWDQSPLFKKVYEEEYGQFGGEPFGCLVGDYYFDHSPPDVEL
LRGMSQIAAASHTPFIAAAAPTAMQMDSWQELSNPRDLTKIFQTPEYAAWRSLRESEDSR
YIGLAMPRFLARQPYGAKSDPVEEFDFEEDVEGADHNKYTWANSAYAMATNITRAFKMYG
WCTRIRGIESGGAVENLPTHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLIHKKN
SDFAAFIGAQSLQKPAEYDDPDATANANLSARLPYLFATCRFAHYLKCMVRDKIGSFKER
DQLQLWLQEWIYNYVDGNPAISSDETKAMKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQ
LEGLTVSLRLVSKLPSIKGA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggccgaaaccgacacgaacgcccaggcccagcccgaagcccaaaccgaaacggtggaa
gccagcgagtttggctcgctgttgcagcgggaattcaagcctaaatccgatcaggccaag
caggcggtcgagaatgccgtccacaccttggccgagcaagccttgcagcatacgacgctg
atttccagggacgtgctcaagtccatcgagtcgatgatcgccgccatcgaccgcaagctg
agcgaacagatcaatctgatcatgcaccattcggagttccagcaactggagggcgcttgg
cgcggattgagctacctggttaacaataccgaaaccgacgagatgttgaagattcgggtg
atgaacatctctaagaaggagttggcaaaaaatcttaaaaaattcaaaggggttgcctgg
gaccaaagcccgctgttcaagaaagtctacgaagaagagtacggccagttcggcggcgaa
ccgttcggttgcctggtgggtgactactacttcgaccatagcccaccggatgtcgaattg
ttgcggggaatgtcgcagatcgccgctgcttctcacacgccgttcatcgccgccgccgcg
cccacggccatgcagatggattcctggcaggaattgagcaatccgcgcgatctcaccaag
atcttccagactccggaatatgctgcttggcggtcgctgcgcgaatcggaggattcccgt
tacattggcttggccatgccgcgatttctggcgcgccagccctacggggccaagtccgat
ccagtcgaggagttcgatttcgaggaagacgtggaaggcgccgaccacaacaaatatacc
tgggccaattcggcctatgcgatggccaccaacattacccgggcgttcaagatgtatggc
tggtgtacccggattcgcggcatcgaatccggcggcgcggtggagaatctgccgacccat
accttcccgacggatgacggtggcgtggacatgaagtgtcccaccgaaatcgccatcagc
gaccggcgcgaggcggagttggccaagaacggattcatgccgctgatccacaagaagaac
agtgacttcgcggcttttatcggtgcccagtcgctgcaaaagccggccgagtacgatgat
ccggacgccaccgccaacgccaatctgtcggcccgcttgccctatctgttcgcgacctgc
cgcttcgcccactacctgaaatgcatggtgcgcgacaagatcggctcgttcaaggaacgc
gatcagttgcaactctggttgcaggaatggatttacaactatgtggacggcaatcccgcc
atttccagcgacgagaccaaggccatgaaacccttggccgccgccgaggtggtggtggag
gaggtggaaggcaatccaggctactacacttcaaagttcttcctgcgcccccactatcag
ttggaagggttgaccgtgtcgctacgcctggtctccaaactgccttcgatcaagggagct
tag

DBGET integrated database retrieval system