Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_08625
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Entry
IPM89_08625 CDS
T10208
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00020
Citrate cycle (TCA cycle)
cbly00190
Oxidative phosphorylation
cbly00650
Butanoate metabolism
cbly00720
Other carbon fixation pathways
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01200
Carbon metabolism
Module
cbly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cbly_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cbly_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IPM89_08625
00650 Butanoate metabolism
IPM89_08625
09102 Energy metabolism
00190 Oxidative phosphorylation
IPM89_08625
00720 Other carbon fixation pathways
IPM89_08625
Enzymes [BR:
cbly01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IPM89_08625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
DAO
HI0933_like
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QQS52999
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Position
complement(1948213..1950003)
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AA seq
596 aa
AA seq
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MSNAYKIVHHNYDVVVVGAGGAGLRATFGMAQKGLKTACLTKVFPTRSHTVAAQGGMSAS
LGNMGQDLWQWHMYDTVKGSDWLGDQDAIEYMCREAVPAVIELEHYGVPFSRTEEGKIYQ
RPFGGMTTNYGEGTAQRTCAAADRTGHAILHTLYQQALRHDAEFFIEYFALDLIMDDEGA
CRGVVAWDLSDGSLHVFRAHQTVLATGGYGRAYFSATSAHTCTGDGNGMVLRAGLPLQDM
EFTQFHPTGIYGSGCLMTEGCRGEGGYLTNSLGERFMERYAPNAKDLASRDVVSRSMTIE
IREGRGVGEHKDHIHLHLEHLGADVINERLPGIAETAHIFAGVDVTKEPAPVLPTVHYNM
GGIPTNYRGEVVILKDGNPDHIIPGLMAIGEAACVSVHGANRLGSNSLLDIVVFGRAAAD
RCAELTQPNSPHKATPQDAVDRIVTRFDHLRHAKGENPTASLRMRMQRTMQNHAAVFRTG
ESMAEGINLLEEVYAGFEHIGVSDRGLVWNSDLVETLELENLLQCAMVSIKSAINRPESR
GAHAREDYPDRDDENWMKHTLSWLDPKGQVTIDYRPVHTYTLTDEVEYIPPKKRTY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcatacaaaatcgttcatcataattacgatgtggtcgtggtcggtgccggc
ggcgccgggctgcgcgccaccttcggcatggcgcagaaaggattgaagaccgcctgcctg
accaaggtgttccccacccgcagccataccgtggccgcccagggcggcatgtcggcgtcg
ctcggcaacatggggcaggatctgtggcagtggcacatgtacgacaccgtcaagggttcc
gactggctcggcgaccaggacgccatcgaatacatgtgccgcgaggcggtcccggcggtc
atcgagctcgaacattacggtgtgccgttctcacgcaccgaggaaggcaagatttaccag
cgcccgttcgggggcatgaccaccaactacggcgaaggcaccgcccagcgcacctgcgcc
gccgccgaccgtaccggtcacgccattctgcacaccctgtatcagcaggcgctcaggcac
gacgccgagttcttcatcgagtatttcgcgctcgacctgatcatggacgacgaaggcgcc
tgtcgcggcgtggtggcctgggatctgtccgacggctcgctgcatgtgttccgcgcccac
cagaccgtgctggccaccggcggctacggccgtgcctacttctcggcgacctccgcccac
acctgcaccggcgacggtaacggcatggtgctccgcgccgggttaccgttgcaggacatg
gagttcacccagttccacccgaccggtatctacggttccggttgcctgatgaccgaaggt
tgtcgtggcgagggtggctatctgaccaactcgctgggcgagcgctttatggagcgctat
gcgccgaacgccaaggatctggcctcccgcgacgtggtgagccgctccatgacgattgaa
atccgcgaaggccgcggcgtcggcgagcacaaggatcacattcacctgcacctggagcac
ttgggtgccgatgtcatcaacgagcggctgccgggcatcgccgagaccgcccacattttt
gccggggtcgacgtgaccaaggagccggcgccggtgctgccgaccgtgcattacaacatg
ggtggcattccgaccaattatcgcggcgaggtggtcatcctcaaggatggcaaccccgac
cacatcattcccggcctgatggccatcggcgaagcagcctgcgtgtcggtgcatggcgcc
aaccgcctgggttccaactcactgctcgacatcgtggtgttcggccgcgccgccgccgac
cgctgcgccgaactgacccaacccaacagcccgcacaaggccacgccgcaagacgccgtc
gatcggatcgttacccgcttcgaccacctgcgccatgccaagggtgaaaacccgaccgcc
agcttgcggatgcggatgcagcggaccatgcagaaccacgccgcggtattccgcaccggc
gagtccatggccgagggcatcaatctgctggaagaagtgtacgctggcttcgagcacatc
ggcgtgagcgatcgcggtttggtgtggaactccgatctggtcgaaacgctggaactggaa
aacctgctgcaatgtgcgatggtttccatcaaatcggcgatcaatcgtccggagagccgc
ggcgcgcacgctcgcgaggactatccggatcgcgacgacgagaactggatgaagcacacc
ttgtcttggctggatcccaaaggtcaggtcaccatcgactaccggccggtacacacttat
accctgaccgacgaggtggaatacattccgcccaagaagcgcacttattaa
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