Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_09435
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Entry
IPM89_09435 CDS
T10208
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IPM89_09435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbly03400
]
IPM89_09435
Enzymes [BR:
cbly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPM89_09435
DNA repair and recombination proteins [BR:
cbly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IPM89_09435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
AAA_22
TrwB_AAD_bind
WHD_PriA
zf-CHY
HypA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QQS53146
LinkDB
All DBs
Position
2110578..2112788
Genome browser
AA seq
736 aa
AA seq
DB search
MPGPILRIAVPSPLDRVFDYLPPPGCDLATLQPGLRVRVPFGRRHVVGFLLELGADTTLD
PAALRPAQTVLDTEAVLPADVLALLRWAQRYYHHPPGEVFAAALPTLLRQGESTELSAPA
PLWQITAAGHAALATGLSRAPAQRLLLDYLARCSDGADPNTLRAVVRDSTATLRALRAKN
WVEPLARPALALAETAFAPRPPPELNAAQAAAVTSVAAELDRFQVFLLEGVTGSGKTEVY
LRLIEAVLARDRQALVLTPEIGLTPQLLARFRERLPGPLAVLHSGLSDRERLNAWLLARA
GTARVVVGTRSAVFTPLRAPGILIVDEEHDPSFKQQEGFRYHARDLAVIRGRQLGIPVVL
GSATPALESRHNAERGRYRLLQLPERVGGGAEAPIEILDVRRQPMAEGLSRPLLERMRIH
LARNEQVLLFLNRRGFAPILLCHECGWLSQCRHCDARMTLHLRQRRLVCHHCGDSQPVEA
ACPLCGSVDLRALGHGTERLEAALRREFPEIDITRMDRDSTRRRGSLEALLADIHDGGRR
ILIGTQMLAKGHHFPEVTLVGIVDADQGLYGIDFRAGERMAQLVLQVAGRAGRAEKPGSV
IIQTHHPDHPLLHVLVSQGYPAFAAAALAERQAAWLPPFAHQALLRAEAAEPERAMAFLR
AARTLAEIRADGVELLGPAPAPMERRAGRFRAQLLLQAARRQDLHRFLNPWIARLRTEHA
DRRVRWSLDIDPAELF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggccccattttgcggatcgccgtcccttcgcctctggatcgggttttcgattac
ctgccaccgccgggctgcgacctggccaccctgcaaccgggcttgcgggtgcgggtaccg
ttcggccggcgtcacgtcgtcggttttctgctcgaactcggcgccgataccacgctggac
cccgccgcgttgcggccggcgcagacggtgctcgataccgaagcggtgctgcccgctgac
gtattggcgctgctgcgatgggcacagcgttactaccatcatccccctggcgaagtcttc
gccgccgctctgccgacactcttgcgccaaggcgaatcgaccgagctatcagcgccggcg
ccactctggcaaatcaccgccgccgggcacgccgcgctcgccaccgggctgagtcgcgca
cccgcccagaggctactgctcgattatctggcacgctgttccgacggcgccgatcccaac
accttgcgcgcggtggtgcgtgacagcaccgccaccttgcgcgcgctgcgcgccaaaaac
tgggtggagcctctcgcccgtccagccttggccttggcggaaaccgcgttcgcgccacgc
ccgccgcccgaactcaacgcggcgcaggcggcggcggtgaccagcgtcgcggccgagctg
gaccgcttccaagtctttctgctggaaggcgtcaccggcagcggcaaaaccgaggtctac
ctgcgcctgatcgaagccgtgctggcgcgcgaccggcaggcgctggtactgaccccggaa
atcggcctgaccccgcaattgctggcccgctttcgggagcggctgccaggaccgctggcc
gtactacactccggcctgagcgatcgggaacgattgaatgcctggctactggcccgcgcc
ggcaccgcccgggtggtggtcggcacccgctcggcggtgttcacgccactgcgcgcgccg
ggcatcctcattgtcgacgaagagcacgatccgtccttcaaacagcaggagggcttccgc
tatcacgcccgcgatctggcggtcattcgtggccggcaactcgggattccggtggtactg
ggttcggccaccccggctctggaaagccgccacaacgccgagcgcggccgctaccgcttg
ctgcaactaccggaacgggtcggcggcggcgcggaagcgcccatcgagattctggacgtg
cgtcgccagccgatggccgagggactgtcgcggccactgctggagcgaatgcggatccat
ctggcccgcaacgaacaggtgttgctatttctcaaccggcgcggcttcgccccgattctg
ctctgccacgaatgcggctggctgagtcagtgccgccactgcgacgcccgcatgaccttg
catctacgccagcgtcggctggtctgtcaccactgcggcgacagtcagccggtggaggcc
gcctgcccgctctgcggcagcgtggacctgcgggcgctcggccacggcaccgaacgcctg
gaggccgcgctgcggcgggaatttccagagatcgacatcacccgaatggatcgcgacagc
acccgccgccgtggcagcctggaagccttgttagccgatattcacgacggtggtcgccgt
atcctgatcggcacccagatgctggccaagggccaccatttccccgaggtgaccctggtg
ggaatcgtcgatgccgaccagggattgtacggcatcgactttcgggccggcgagcgcatg
gcgcaactggtcctgcaggtcgccggccgcgctggccgcgccgagaagccaggttcggtc
attattcagacccaccaccccgaccatccgctgctgcacgtactggtctcccagggttat
ccggctttcgcggcggcggcactggcggagcggcaagcggcatggctgcccccattcgcc
catcaggcgctgctgcgggcggaagcggccgagccggaacgagccatggcatttctacga
gccgcgcggacgctggccgagatccgcgccgacggggtcgaactgctgggtccggcaccc
gcgccgatggaacgccgggccggccgctttcgggcgcagctgctgctgcaagcggcgcgg
cgtcaggatctgcatcgtttcctgaatccctggattgcgcggttgcgaacggagcatgcg
gatcgccgggtgcgctggtccttggatatcgatccggcggaactcttctga
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