Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_09785
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Entry
IPM89_09785 CDS
T10208
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
Enzymes [BR:
cbly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IPM89_09785
Transfer RNA biogenesis [BR:
cbly03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IPM89_09785
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GFIT
Other DBs
NCBI-ProteinID:
QQS53203
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Position
2182916..2184730
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AA seq
604 aa
AA seq
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MNIPQHSLVLYKNGPARVASLGDKLEIELEDGRSLRVRPKDVLPLHPGPLRGLRELDLPP
GEVEAACELLEGEQTTLPDLAELIYGAYTPAAAWATWRLLDEGLYFQGTPEAIVVRPLAE
VAQERVAREAKAAERETWNEFLSRARAGRCVAEDAAFLHEIEEVAWGQREQSRVLQALDC
NQNPESAHGLLLRLGHWDGTINPYPRRIGAPLVTATADLPELPDEPRLDLTGLTAYAIDD
EGNLDPDDALSLDGNRLWVHIADAAALVPPDSPADREARARGATLYLPETTVPMLPAAAV
PRLGLGLSEITPALSFGLTLDADGVVTDVEIAPSRVRVRRLSYEDVELRLDEEPFRTLHE
LAQRHRTRRRANRAVFMDLPEVKMQVTDGRVSIKPLPRSRSRMLVTEAMLMAGEAAARFA
LERGLPFPFTTQDVAVGDADREPAGLAAMYALRRSLRPRQYSGQPGPHGGLGLDVYAQVT
SPLRRYLDLVAHQQLRAFLRGGDPLEAQAIIERVGAAEVAARGIRRAERLSREHWTVVYL
QQHPGWQGKGVLVEKRMPRGVVLIPELALEARVKVAESVASDSSLPLRLTGLELPAREAY
FKVG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcccgcaacatagtttagtgctttacaagaacggtccggcccgcgtcgccagt
ctcggcgacaagctggagattgagctggaggatggccggtcgctacgggtgcgccccaag
gatgtgctgccactgcatcccggaccgttgcgcgggttgcgcgaactggatcttccgcct
ggcgaggtggaggcagcctgcgagttactggagggcgagcaaaccaccttgcccgatctg
gcggaattgatctacggtgcctacacgcccgccgccgcctgggccacttggcggctgctg
gacgagggcttgtatttccagggtacgcccgaggcaatcgtggtccggccgctggcggag
gtagcgcaagaacgggtggcgcgcgaggcgaaagcggccgaacgcgaaacctggaacgag
tttctgagccgcgcccgcgccggccgctgcgtcgccgaggatgccgcgtttctgcacgaa
atcgaggaagtggcctggggccagcgcgagcagagccgggtgttgcaggcgctcgattgc
aaccagaacccggaaagcgcgcatggcctgttgctgcggctgggccattgggacggtacg
atcaacccctatccccggcggatcggggcgccactggtgacggcgacggcggatctgccc
gaactgccggacgagccgcggctggatttgaccggactgacggcttacgccatcgacgat
gaaggcaacctcgatcccgacgacgccctcagcctggacggcaatcgtttgtgggtgcat
atcgccgacgccgccgccctggtgccgccggacagtcccgccgatcgggaagcgcgggcg
cggggcgcgacgctttatctgccggaaaccaccgtgccgatgctgccggcggcggcggtg
ccgcggcttggtctggggctgagcgagatcacgccggcgctgtcgttcggcctgacgctg
gatgccgatggcgtcgtcaccgacgtggagatcgcgcccagccgggtgcgagtgcggcgg
ctgagctatgaagacgtggagttgcggctggacgaggagccgtttcgtactctgcacgaa
ctggcccagcgccatcggacccgccgccgcgccaaccgggcggtgttcatggacctgccg
gaagtgaagatgcaggtcaccgacgggcgggtgtccatcaagccgttgcctcgctcgcgc
agccggatgctggtgaccgaggcgatgttgatggccggcgaagcggcggcccgctttgcg
ctggagcgcgggctgccgtttccgttcaccactcaggatgtggcggtgggcgacgcggac
cgggagccggccgggctggcggcgatgtacgccctgcgccgcagcctgcgcccacgtcag
tacagtggccagcccggcccacacggtggtttggggctcgacgtgtacgcgcaggtcacc
agcccgctgcggcgttatctggatttggtcgcgcaccagcagttacgggcgtttctgcgg
ggcggcgatcccctggaggcccaggcgatcatcgaacgggtcggggcggcggaagtggcg
gcgcgggggatccggcgggccgaacggctgtcccgcgagcattggaccgtggtgtatctg
cagcaacatcccggctggcaaggcaaaggggtgctggtggaaaagcggatgccgcgcggc
gtggtgctgattcccgaactggctctggaggcgcgagtgaaggtggctgagagcgtggcg
tcggacagcagcttgccgctacggctgaccggcctggagttaccggcgcgcgaggcatat
ttcaaggtcggctga
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