Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_09950
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Entry
IPM89_09950 CDS
T10208
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00470
D-Amino acid metabolism
cbly00550
Peptidoglycan biosynthesis
cbly01100
Metabolic pathways
cbly01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IPM89_09950
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IPM89_09950
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IPM89_09950
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
IPM89_09950
Enzymes [BR:
cbly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IPM89_09950
Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
Precursor biosynthesis
Amino acid ligase
IPM89_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATP-grasp_3
TTL
ATP-grasp_5
CPSase_L_D2
ATPgrasp_ST
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
QQS53234
LinkDB
All DBs
Position
2217603..2218553
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AA seq
316 aa
AA seq
DB search
MQQIQQRTASGPAEFGKVAVLMGGWSAERAVSLRSGQAVLAALRARGVDAHGIDADREIL
RVLSDGGFDRVFIVLHGRGGEDGVIQGALEILGLPYTGSGVLASALGMDKLRTKQVWQGA
GLPTPPWRLAESVAELADAARELGLPLAVKPAREGSSIGISRVDAPEQFQAAWEQAAACD
SLVLVEPWIQGQEYTGALLGDEALPLIRLETPRAFYDYEAKYHANDTRYLCPCGLPEPRE
AELQALVRQAFAAVDGTGWGRVDVMVDAEGQPWLLEVNTVPGMTDHSLVPMAARVAGLDF
EDLVWRILETSLARLD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagatacaacaacggacggcgagcggaccggcggagtttggcaaggtcgcggtg
ctgatgggcggctggtcggcggagcgggcggtgtcccttagaagtggtcaggcggtgctg
gcggcgctgcgggcgcgcggcgtggacgcccacggtatcgacgccgaccgcgagatcttg
cgggtgttgtccgacggcggtttcgaccgggtttttatcgtcctgcacggacgtggtggc
gaggatggcgtcattcagggggcgttagagattctgggcctaccttataccggtagcggc
gtactggcttcggcgctggggatggacaagctgcgcaccaagcaggtctggcaaggcgcg
ggcctgccaacgccgccctggcggttggcggagagcgtggcggaactggcggatgccgcg
cgggagctgggtttgccgctggcggtgaagccggctcgcgagggctccagcatcggtatt
agccgggtcgatgccccggagcagttccaggccgcctgggaacaggccgccgcctgcgat
tcgctggtactggtggagccgtggattcaaggccaggagtacaccggcgcgctgctgggc
gacgaggcattgccgctgatccggttggaaacgccccgcgctttctacgactacgaggcc
aagtaccacgccaacgacacccgctatctctgtccctgcggcctgcccgaaccgcgggaa
gcggaattgcaagccttggtgcggcaggctttcgccgcggtggacggtaccggctggggt
cgggtcgatgtgatggtggatgccgagggtcaaccctggttgttggaagtcaacaccgta
cccggcatgaccgatcacagcttggtccccatggcggcgcgggtggccggactcgatttc
gaggatttggtctggcggattttggagaccagtctggcgcggctggactga
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