Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_10145
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Entry
IPM89_10145 CDS
T10208
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IPM89_10145 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbly03019
]
IPM89_10145 (orn)
03009 Ribosome biogenesis [BR:
cbly03009
]
IPM89_10145 (orn)
Messenger RNA biogenesis [BR:
cbly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IPM89_10145 (orn)
Ribosome biogenesis [BR:
cbly03009
]
Eukaryotic type
Pre-60S particles
RNases
IPM89_10145 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QQS53268
LinkDB
All DBs
Position
2265155..2265709
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AA seq
184 aa
AA seq
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MSPDNLIWIDLEMTGLDTQTDRIIEIATVVTDSQLNVLAEGPVLAIHQSDATLAAMDDWN
RKQHGGSGLATRVRASELDEREAEIRTLAFLSQHVPPGKSPMCGNSICQDRRFLARCMPD
LEAYFHYRNLDVSTLKELARRWYPERVKGFNKSSTHLALQDIHDSIEELRFYRERLFPPV
AGNP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgacaacctgatctggatcgacctggaaatgaccggcctggacacccagacc
gaccgcatcatcgaaatcgcgaccgtcgttaccgacagccaactgaacgtgctcgccgaa
gggccggtgctggccatccaccaaagcgacgcgacgctggcggcgatggacgactggaac
cggaagcagcacggcgggtccggcctggcgacccgggtgcgcgccagcgagttggacgaa
cgcgaggccgaaatacgtaccttggcatttctcagccagcatgtccccccaggcaagtcg
ccgatgtgcggtaatagcatctgtcaggaccgacgcttcctggcgcgctgcatgccggat
ctggaagcgtattttcactaccgcaacctggacgtcagcacactcaaggaactggcccgc
cgctggtatcccgagcgggtcaagggcttcaacaagagctcgacccacctggcgctgcaa
gatattcacgattccatcgaggagctgcgtttctaccgcgagcgcttgttcccgccagtg
gccggcaatccctag
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